G423878


Basic Information

Item Value
gene id G423878
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9661163 ~ 9661555 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU486766
CAGGTTCAAGAGAGGCCAATCAGTTTGTGCCATGTGTTAATGATGTGATTGCTTACAGACTGCATGTAAAGGACCTATCAGACTCTAGATATAGAAAGAAGGTTCACTCCTATTACTTGTGCATGGGAGAAACTGCAACATGCAATATGACGGAATATGCATCACCTTCTAAGTAAAAGAGCCAATTGCTGATTGGTAAAGTCATTGCGTCACTGCAGCTGACGTTAGAAGCTCCGTTCCTATAGAAACCTGAGACTTGCGCTTAGGACTGCACATGCACATGGTCTCGTCTAGCCTTTTTTTTTTTTTTTTTAACTCTATTTGAGCATAAGAAAGAACATTTATTGGACAGCTTATGTCAAATTTTATTGCTGATTTGAAATTGTGAGTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486766 True 393 lncRNA 0.39 1 9661163 9661555

Neighbor

gene id symbol gene type direction distance location
CI01000304_09564068_09565679 HRH2B coding upstream 95385 9561005 ~ 9565778 (+)
CI01000304_09532680_09535197 NA coding upstream 124732 9532680 ~ 9536431 (+)
CI01000304_09529802_09531061 NA coding upstream 129859 9529391 ~ 9531304 (+)
CI01000304_09494392_09503344 PCDH1G32 coding upstream 157575 9494392 ~ 9503588 (+)
CI01000304_09491577_09494024 PCDH1G31 coding upstream 167139 9491577 ~ 9494024 (+)
CI01000304_09683383_09690928 KCNIP1B, KCNIP1 coding downstream 21828 9683383 ~ 9690941 (+)
CI01000304_09692774_09694613 NA coding downstream 31219 9692774 ~ 9694613 (+)
CI01000304_09695997_09696577 NA coding downstream 34442 9695997 ~ 9697143 (+)
CI01000304_09757695_09760278 NA coding downstream 95538 9757093 ~ 9760699 (+)
CI01000304_09879900_09938234 NLGN2, NLGN2A, NLGN2B coding downstream 218299 9879854 ~ 9939321 (+)
G423877 NA non-coding upstream 319 9660434 ~ 9660844 (+)
G423876 NA non-coding upstream 1005 9659708 ~ 9660158 (+)
G423842 NA non-coding upstream 1891 9658246 ~ 9659272 (+)
G423841 NA non-coding upstream 52002 9579575 ~ 9609161 (+)
G423867 NA non-coding upstream 90890 9570018 ~ 9570273 (+)
G423892 NA non-coding downstream 52506 9714061 ~ 9714287 (+)
G424323 NA non-coding downstream 400879 10062434 ~ 10062747 (+)
G424326 NA non-coding downstream 404540 10066095 ~ 10066360 (+)
G424277 NA non-coding downstream 453779 10115334 ~ 10115681 (+)
G424246 NA non-coding downstream 454788 10116343 ~ 10127322 (+)
G423614 NA other upstream 711741 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 988608 8671770 ~ 8672555 (+)
CI01000304_08232073_08235598 NA other upstream 1426203 8231293 ~ 8235655 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other upstream 1680428 7979078 ~ 7980735 (+)
G424251 NA other downstream 527267 10188822 ~ 10189404 (+)
CI01000304_10555326_10571933 NA other downstream 893731 10555216 ~ 10572164 (+)
G425718 NA other downstream 2767150 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 3894896 13578049 ~ 13595097 (+)

Expression


Co-expression Network