G423892


Basic Information

Item Value
gene id G423892
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9714061 ~ 9714287 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU486780
CGCGCGTCATTCAGGTTTGGTTGAGCTTCTGCTTATGTTTGCTGATCAATGTTTATATGTAAGTAAAAGCCTAAATTAAATCTGTTCATCATAAAAAGCAATCAAGTCTCTTCAGAAAATTTGGACTAAACCATTCAATTCATATGGATTAGATTTACGATCTCTTCATAAACTTTTTGAAGCATCAAAGTTTCAATTCCATAGGTTGTCTATGGAGTGACAGACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU486780 True 227 lncRNA 0.33 1 9714061 9714287

Neighbor

gene id symbol gene type direction distance location
CI01000304_09695997_09696577 NA coding upstream 16918 9695997 ~ 9697143 (+)
CI01000304_09692774_09694613 NA coding upstream 19448 9692774 ~ 9694613 (+)
CI01000304_09683383_09690928 KCNIP1B, KCNIP1 coding upstream 23120 9683383 ~ 9690941 (+)
CI01000304_09564068_09565679 HRH2B coding upstream 148283 9561005 ~ 9565778 (+)
CI01000304_09532680_09535197 NA coding upstream 177630 9532680 ~ 9536431 (+)
CI01000304_09757695_09760278 NA coding downstream 42806 9757093 ~ 9760699 (+)
CI01000304_09879900_09938234 NLGN2, NLGN2A, NLGN2B coding downstream 165567 9879854 ~ 9939321 (+)
CI01000304_09961620_09975855 GIGYF1 coding downstream 247333 9961620 ~ 9975870 (+)
CI01000304_09976509_10020020 EFNB3A coding downstream 262222 9976509 ~ 10020575 (+)
CI01000304_10093597_10099497 KDM6BA, KDM6BB, KDM6B coding downstream 379310 10093597 ~ 10099497 (+)
G423878 NA non-coding upstream 52506 9661163 ~ 9661555 (+)
G423877 NA non-coding upstream 53217 9660434 ~ 9660844 (+)
G423876 NA non-coding upstream 53903 9659708 ~ 9660158 (+)
G423842 NA non-coding upstream 54789 9658246 ~ 9659272 (+)
G423841 NA non-coding upstream 104900 9579575 ~ 9609161 (+)
G424323 NA non-coding downstream 348147 10062434 ~ 10062747 (+)
G424326 NA non-coding downstream 351808 10066095 ~ 10066360 (+)
G424277 NA non-coding downstream 401047 10115334 ~ 10115681 (+)
G424246 NA non-coding downstream 402056 10116343 ~ 10127322 (+)
G424257 NA non-coding downstream 421205 10135492 ~ 10137641 (+)
G423614 NA other upstream 764639 8949036 ~ 8949422 (+)
CI01000304_08671901_08672203 NA other upstream 1041506 8671770 ~ 8672555 (+)
CI01000304_08232073_08235598 NA other upstream 1479101 8231293 ~ 8235655 (+)
CI01000304_07979388_07979919 TMEM230, TMEM230A other upstream 1733326 7979078 ~ 7980735 (+)
G424251 NA other downstream 474535 10188822 ~ 10189404 (+)
CI01000304_10555326_10571933 NA other downstream 840999 10555216 ~ 10572164 (+)
G425718 NA other downstream 2714418 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 3842164 13578049 ~ 13595097 (+)

Expression


Co-expression Network