G424217


Basic Information

Item Value
gene id G424217
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 9743568 ~ 9744018 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU487147
GTCAGATGGCAAAGACATAAAAGGTGAGATACAGTTTATACTTGAGTTTTATCGTTTAGAAGAAAACTAATACAACTACAGTCATAGCTAAGCTTATATACTAGGGATAAATACATGCACCTTTAAATACAGCGACGGGTACATATTGGCACAGTCATATTTGGAGGATAAATGTACATTCACAATCTCCATGCGTGTTTGTGAGTGTCTGTATGTGTGTGTGTATTGGGGTTGTGGCCAGTGTCTGTGACCATATCACCTTTAGTCCCACCAGGGTGACTCTTTGAAGTCTCTGGGGCTGGTGAGAATGTGTTCTGTTTTTCTTTACTGGGGTAACAAAGGTGCCAATGGGGCAATTGGTCCCGGACTTGCCGGAGCCGATTCGTGATTTACATGCACAGTTCAGGAGGCTAAAAGCATTCTGAAGATTCTAACTTGACGGGCAGATCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU487147 True 451 lncRNA 0.43 1 9743568 9744018

Neighbor

gene id symbol gene type direction distance location
CI01000304_09737662_09738777 NA coding downstream 4791 9736746 ~ 9738777 (-)
CI01000304_09726631_09727403 NA coding downstream 13260 9725947 ~ 9730308 (-)
CI01000304_09720695_09725068 UGT5G2 coding downstream 18500 9720276 ~ 9725068 (-)
CI01000304_09699524_09703985 TLX3B coding downstream 36909 9699368 ~ 9706659 (-)
CI01000304_09622805_09640521 NA coding downstream 103028 9622376 ~ 9640540 (-)
CI01000304_09751291_09754997 CLDN7B, CLDX, CLDN7 coding upstream 6903 9750921 ~ 9755245 (-)
CI01000304_09765626_09814386 FGF11B, FGF11, FGF11A coding upstream 21608 9765626 ~ 9814386 (-)
CI01000304_09944778_09945833 NA coding upstream 200605 9944623 ~ 9945833 (-)
CI01000304_09949821_09951564 NA coding upstream 205147 9949165 ~ 9953257 (-)
CI01000304_09955649_09957311 NA coding upstream 211536 9955554 ~ 9959307 (-)
G424159 NA non-coding downstream 46245 9695733 ~ 9697323 (-)
G424169 NA non-coding downstream 48189 9694525 ~ 9695379 (-)
G424203 NA non-coding downstream 52328 9676129 ~ 9691240 (-)
G424202 NA non-coding downstream 68481 9674873 ~ 9675087 (-)
G424201 NA non-coding downstream 71521 9671744 ~ 9672047 (-)
G424218 NA non-coding upstream 187 9744205 ~ 9744618 (-)
G424239 NA non-coding upstream 96089 9840107 ~ 9840527 (-)
G424418 NA non-coding upstream 233241 9977259 ~ 9977486 (-)
G424448 NA non-coding upstream 289576 10033594 ~ 10036068 (-)
G424482 NA non-coding upstream 318247 10062265 ~ 10062752 (-)
CI01000304_09566730_09575706 NA other downstream 174534 9566730 ~ 9575706 (-)
G423386 NA other downstream 878272 8862223 ~ 8865296 (-)
G422810 NA other downstream 2090865 7630159 ~ 7652703 (-)
G422378 NA other downstream 2960522 6744679 ~ 6783046 (-)
CI01000304_10160458_10161768 VAMP2 other upstream 409428 10160458 ~ 10163762 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 446556 10190574 ~ 10192357 (-)
G424808 NA other upstream 700337 10444355 ~ 10542665 (-)
CI01000304_11338304_11348212 ILK other upstream 1603002 11338019 ~ 11348212 (-)
G425580 NA other upstream 2124659 11868677 ~ 11872906 (-)

Expression


Co-expression Network