Gene
RNA
| Item | Value |
|---|---|
| gene id | G424418 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 9977259 ~ 9977486 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU487386 | True | 228 | lncRNA | 0.42 | 1 | 9977259 | 9977486 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_09955649_09957311 | NA | coding | downstream | 17952 | 9955554 ~ 9959307 (-) |
| CI01000304_09949821_09951564 | NA | coding | downstream | 24002 | 9949165 ~ 9953257 (-) |
| CI01000304_09944778_09945833 | NA | coding | downstream | 31426 | 9944623 ~ 9945833 (-) |
| CI01000304_09765626_09814386 | FGF11B, FGF11, FGF11A | coding | downstream | 162873 | 9765626 ~ 9814386 (-) |
| CI01000304_09751291_09754997 | CLDN7B, CLDX, CLDN7 | coding | downstream | 222014 | 9750921 ~ 9755245 (-) |
| CI01000304_10119297_10119833 | NA | coding | upstream | 141404 | 10118890 ~ 10119833 (-) |
| CI01000304_10123588_10128249 | PCOLCE, PCOLCEA | coding | upstream | 145921 | 10123407 ~ 10128249 (-) |
| CI01000304_10137324_10147067 | PER1A | coding | upstream | 159554 | 10137040 ~ 10149531 (-) |
| CI01000304_10160458_10161768 | VAMP2 | coding | upstream | 182972 | 10160458 ~ 10163762 (-) |
| CI01000304_10167646_10169639 | NA | coding | upstream | 188701 | 10166187 ~ 10169639 (-) |
| G424239 | NA | non-coding | downstream | 136732 | 9840107 ~ 9840527 (-) |
| G424218 | NA | non-coding | downstream | 232641 | 9744205 ~ 9744618 (-) |
| G424217 | NA | non-coding | downstream | 233241 | 9743568 ~ 9744018 (-) |
| G424159 | NA | non-coding | downstream | 279936 | 9695733 ~ 9697323 (-) |
| G424169 | NA | non-coding | downstream | 281880 | 9694525 ~ 9695379 (-) |
| G424448 | NA | non-coding | upstream | 56108 | 10033594 ~ 10036068 (-) |
| G424482 | NA | non-coding | upstream | 84779 | 10062265 ~ 10062752 (-) |
| G424474 | NA | non-coding | upstream | 104912 | 10082398 ~ 10090227 (-) |
| G424496 | NA | non-coding | upstream | 182162 | 10159648 ~ 10160361 (-) |
| G424504 | NA | non-coding | upstream | 196113 | 10173599 ~ 10174147 (-) |
| CI01000304_09737662_09738777 | NA | other | downstream | 237788 | 9736746 ~ 9738777 (-) |
| CI01000304_09566730_09575706 | NA | other | downstream | 408225 | 9566730 ~ 9575706 (-) |
| G423386 | NA | other | downstream | 1111963 | 8862223 ~ 8865296 (-) |
| G422810 | NA | other | downstream | 2324556 | 7630159 ~ 7652703 (-) |
| G422378 | NA | other | downstream | 3194213 | 6744679 ~ 6783046 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | upstream | 213088 | 10190574 ~ 10192357 (-) |
| G424808 | NA | other | upstream | 466869 | 10444355 ~ 10542665 (-) |
| CI01000304_11338304_11348212 | ILK | other | upstream | 1369534 | 11338019 ~ 11348212 (-) |
| G425580 | NA | other | upstream | 1891191 | 11868677 ~ 11872906 (-) |
