Gene
RNA
| Item | Value |
|---|---|
| gene id | G424277 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 10115334 ~ 10115681 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU487233 | True | 348 | lncRNA | 0.40 | 1 | 10115334 | 10115681 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_10112119_10114490 | TMEM88A | coding | upstream | 508 | 10109978 ~ 10114826 (+) |
| CI01000304_10093597_10099497 | KDM6BA, KDM6BB, KDM6B | coding | upstream | 15837 | 10093597 ~ 10099497 (+) |
| CI01000304_09976509_10020020 | EFNB3A | coding | upstream | 94759 | 9976509 ~ 10020575 (+) |
| CI01000304_09961620_09975855 | GIGYF1 | coding | upstream | 139464 | 9961620 ~ 9975870 (+) |
| CI01000304_09879900_09938234 | NLGN2, NLGN2A, NLGN2B | coding | upstream | 176013 | 9879854 ~ 9939321 (+) |
| CI01000304_10172353_10175399 | AP4M1 | coding | downstream | 56672 | 10172353 ~ 10175694 (+) |
| CI01000304_10177319_10186557 | ARRB2.L, ARRB2A, ARRB2, ARRB2B | coding | downstream | 61638 | 10177319 ~ 10186665 (+) |
| CI01000304_10189588_10190707 | MED11 | coding | downstream | 73907 | 10189588 ~ 10191798 (+) |
| CI01000304_10192819_10195110 | CLG07H17ORF49, CSSA04H17ORF49 | coding | downstream | 77075 | 10190564 ~ 10195110 (+) |
| CI01000304_10256417_10260924 | NA | coding | downstream | 140542 | 10256223 ~ 10260924 (+) |
| G424326 | NA | non-coding | upstream | 48974 | 10066095 ~ 10066360 (+) |
| G424323 | NA | non-coding | upstream | 52587 | 10062434 ~ 10062747 (+) |
| G423892 | NA | non-coding | upstream | 401047 | 9714061 ~ 9714287 (+) |
| G423878 | NA | non-coding | upstream | 453779 | 9661163 ~ 9661555 (+) |
| G423877 | NA | non-coding | upstream | 454490 | 9660434 ~ 9660844 (+) |
| G424246 | NA | non-coding | downstream | 662 | 10116343 ~ 10127322 (+) |
| G424257 | NA | non-coding | downstream | 19811 | 10135492 ~ 10137641 (+) |
| G424334 | NA | non-coding | downstream | 32773 | 10148454 ~ 10149998 (+) |
| G424336 | NA | non-coding | downstream | 36546 | 10152227 ~ 10152541 (+) |
| G424337 | NA | non-coding | downstream | 37503 | 10153184 ~ 10153404 (+) |
| CI01000304_09564068_09565679 | HRH2B | other | upstream | 549761 | 9561005 ~ 9565778 (+) |
| G423614 | NA | other | upstream | 1165912 | 8949036 ~ 8949422 (+) |
| CI01000304_08671901_08672203 | NA | other | upstream | 1442779 | 8671770 ~ 8672555 (+) |
| CI01000304_08232073_08235598 | NA | other | upstream | 1880374 | 8231293 ~ 8235655 (+) |
| CI01000304_07979388_07979919 | TMEM230, TMEM230A | other | upstream | 2134599 | 7979078 ~ 7980735 (+) |
| G424251 | NA | other | downstream | 73141 | 10188822 ~ 10189404 (+) |
| CI01000304_10555326_10571933 | NA | other | downstream | 439605 | 10555216 ~ 10572164 (+) |
| G425718 | NA | other | downstream | 2313024 | 12436554 ~ 12436605 (+) |
| CI01000304_13578347_13595075 | NA | other | downstream | 3440770 | 13578049 ~ 13595097 (+) |
