G424496


Basic Information

Item Value
gene id G424496
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10159648 ~ 10160361 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU487473
GCACGATTTACTAATTTGTTCCCTCAATTTGCTAAATCGTGTGCACAATTTATATATTGAGGAAACGAATTAGTAAATCATGCGTACGATTCAGCAAATCGAGGGAACGAAATAGTAAATCGTCCACACGATTTAGCAAATCGAGGAAACGAAATAGTAAAACGTCCACACAATTTAGCAGATCGAGGGAACGAAATAGTAAAACATCCGCACGATTTAGCAGATCAAGGGAACAAAATAGTAAAACGTCCGCACGATTTAGCAAATCGAGGGAACGAAATAGTAAAACGTCCACACAATTTAGCAGATCAAGGGAACGAAATAGTAAATCATGCGCATGATTTAGCAAATTGAGGGAATGAAATAGTAAAACGTCCACAAGATTTAGCAGATCGAGGGAATAAAATAGTAAAACGTCTGCACGATTTAGCAGATCGAGGGAACGAAATAGTAAAACATCCGCACGATTTAGCAAACCAAGGGAACGAAATAATAAAACGTCTGCACGATTTAGCAAATCGAGGGAACGAAATAGTAAATCGTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU487473 True 546 lncRNA 0.38 2 10159648 10160361

Neighbor

gene id symbol gene type direction distance location
CI01000304_10137324_10147067 PER1A coding downstream 10117 10137040 ~ 10149531 (-)
CI01000304_10123588_10128249 PCOLCE, PCOLCEA coding downstream 31399 10123407 ~ 10128249 (-)
CI01000304_10119297_10119833 NA coding downstream 39815 10118890 ~ 10119833 (-)
CI01000304_09955649_09957311 NA coding downstream 200341 9955554 ~ 9959307 (-)
CI01000304_09949821_09951564 NA coding downstream 206391 9949165 ~ 9953257 (-)
CI01000304_10160458_10161768 VAMP2 coding upstream 97 10160458 ~ 10163762 (-)
CI01000304_10167646_10169639 NA coding upstream 5826 10166187 ~ 10169639 (-)
CI01000304_10187728_10188909 NA coding upstream 26910 10187271 ~ 10188909 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK coding upstream 31037 10190574 ~ 10192357 (-)
CI01000304_10209150_10210418 NA coding upstream 48274 10208635 ~ 10210891 (-)
G424474 NA non-coding downstream 69421 10082398 ~ 10090227 (-)
G424482 NA non-coding downstream 96896 10062265 ~ 10062752 (-)
G424448 NA non-coding downstream 123580 10033594 ~ 10036068 (-)
G424418 NA non-coding downstream 182162 9977259 ~ 9977486 (-)
G424239 NA non-coding downstream 319121 9840107 ~ 9840527 (-)
G424504 NA non-coding upstream 13238 10173599 ~ 10174147 (-)
G424535 NA non-coding upstream 91860 10252221 ~ 10252462 (-)
G424797 NA non-coding upstream 101710 10262071 ~ 10262340 (-)
G424823 NA non-coding upstream 111562 10271923 ~ 10272411 (-)
G424829 NA non-coding upstream 156941 10317302 ~ 10317531 (-)
CI01000304_09737662_09738777 NA other downstream 420177 9736746 ~ 9738777 (-)
CI01000304_09566730_09575706 NA other downstream 590614 9566730 ~ 9575706 (-)
G423386 NA other downstream 1294352 8862223 ~ 8865296 (-)
G422810 NA other downstream 2506945 7630159 ~ 7652703 (-)
G422378 NA other downstream 3376602 6744679 ~ 6783046 (-)
G424808 NA other upstream 283994 10444355 ~ 10542665 (-)
CI01000304_11338304_11348212 ILK other upstream 1186659 11338019 ~ 11348212 (-)
G425580 NA other upstream 1708316 11868677 ~ 11872906 (-)
G426106 NA other upstream 2176340 12336701 ~ 12340228 (-)

Expression


Co-expression Network