Gene
RNA
| Item | Value |
|---|---|
| gene id | G424504 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 10173599 ~ 10174147 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU487481 | False | 273 | lncRNA | 0.40 | 4 | 10173599 | 10174147 |
| TU487482 | True | 165 | lncRNA | 0.39 | 2 | 10173599 | 10173855 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_10167646_10169639 | NA | coding | downstream | 3960 | 10166187 ~ 10169639 (-) |
| CI01000304_10160458_10161768 | VAMP2 | coding | downstream | 9837 | 10160458 ~ 10163762 (-) |
| CI01000304_10137324_10147067 | PER1A | coding | downstream | 24068 | 10137040 ~ 10149531 (-) |
| CI01000304_10123588_10128249 | PCOLCE, PCOLCEA | coding | downstream | 45350 | 10123407 ~ 10128249 (-) |
| CI01000304_10119297_10119833 | NA | coding | downstream | 53766 | 10118890 ~ 10119833 (-) |
| CI01000304_10187728_10188909 | NA | coding | upstream | 13124 | 10187271 ~ 10188909 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | coding | upstream | 17251 | 10190574 ~ 10192357 (-) |
| CI01000304_10209150_10210418 | NA | coding | upstream | 34488 | 10208635 ~ 10210891 (-) |
| CI01000304_10220812_10226103 | NA | coding | upstream | 45442 | 10219589 ~ 10226103 (-) |
| CI01000304_10284509_10291314 | NLE1, NLE1.S | coding | upstream | 110362 | 10284509 ~ 10291314 (-) |
| G424496 | NA | non-coding | downstream | 13238 | 10159648 ~ 10160361 (-) |
| G424474 | NA | non-coding | downstream | 83372 | 10082398 ~ 10090227 (-) |
| G424482 | NA | non-coding | downstream | 110847 | 10062265 ~ 10062752 (-) |
| G424448 | NA | non-coding | downstream | 137531 | 10033594 ~ 10036068 (-) |
| G424418 | NA | non-coding | downstream | 196113 | 9977259 ~ 9977486 (-) |
| G424535 | NA | non-coding | upstream | 78074 | 10252221 ~ 10252462 (-) |
| G424797 | NA | non-coding | upstream | 87924 | 10262071 ~ 10262340 (-) |
| G424823 | NA | non-coding | upstream | 97776 | 10271923 ~ 10272411 (-) |
| G424829 | NA | non-coding | upstream | 143155 | 10317302 ~ 10317531 (-) |
| G424830 | NA | non-coding | upstream | 143464 | 10317611 ~ 10318093 (-) |
| CI01000304_09737662_09738777 | NA | other | downstream | 434128 | 9736746 ~ 9738777 (-) |
| CI01000304_09566730_09575706 | NA | other | downstream | 604565 | 9566730 ~ 9575706 (-) |
| G423386 | NA | other | downstream | 1308303 | 8862223 ~ 8865296 (-) |
| G422810 | NA | other | downstream | 2520896 | 7630159 ~ 7652703 (-) |
| G424808 | NA | other | upstream | 270208 | 10444355 ~ 10542665 (-) |
| CI01000304_11338304_11348212 | ILK | other | upstream | 1172873 | 11338019 ~ 11348212 (-) |
| G425580 | NA | other | upstream | 1694530 | 11868677 ~ 11872906 (-) |
| G426106 | NA | other | upstream | 2162554 | 12336701 ~ 12340228 (-) |
