Gene
RNA
| Item | Value |
|---|---|
| gene id | G424892 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 10778756 ~ 10785257 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU487899 | True | 6400 | lncRNA | 0.35 | 3 | 10778756 | 10785257 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_10350748_10388571 | CADM2A | coding | downstream | 390154 | 10349869 ~ 10388602 (-) |
| CI01000304_10284509_10291314 | NLE1, NLE1.S | coding | downstream | 487442 | 10284509 ~ 10291314 (-) |
| CI01000304_10220812_10226103 | NA | coding | downstream | 552653 | 10219589 ~ 10226103 (-) |
| CI01000304_10209150_10210418 | NA | coding | downstream | 567865 | 10208635 ~ 10210891 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | coding | downstream | 586399 | 10190574 ~ 10192357 (-) |
| CI01000304_10812673_10812980 | NA | coding | upstream | 27276 | 10812533 ~ 10815238 (-) |
| CI01000304_11065581_11077156 | NA | coding | upstream | 279982 | 11065239 ~ 11077156 (-) |
| CI01000304_11083948_11091592 | PITPNAB, PITPNA | coding | upstream | 298581 | 11083838 ~ 11091592 (-) |
| CI01000304_11110559_11121354 | SLC43A2B | coding | upstream | 325206 | 11110463 ~ 11122171 (-) |
| CI01000304_11124801_11135838 | NA | coding | upstream | 338900 | 11124157 ~ 11137342 (-) |
| G424891 | NA | non-coding | downstream | 54848 | 10713964 ~ 10723908 (-) |
| G424806 | NA | non-coding | downstream | 198744 | 10565628 ~ 10580012 (-) |
| G424813 | NA | non-coding | downstream | 214024 | 10452461 ~ 10564732 (-) |
| G424810 | NA | non-coding | downstream | 217374 | 10547680 ~ 10561382 (-) |
| G424817 | NA | non-coding | downstream | 287636 | 10433180 ~ 10491120 (-) |
| G424907 | NA | non-coding | upstream | 63944 | 10849201 ~ 10849483 (-) |
| G424932 | NA | non-coding | upstream | 113850 | 10899107 ~ 10899901 (-) |
| G425104 | NA | non-coding | upstream | 149124 | 10934381 ~ 11001594 (-) |
| G425126 | NA | non-coding | upstream | 352120 | 11137377 ~ 11137710 (-) |
| G425167 | NA | non-coding | upstream | 354657 | 11139914 ~ 11140117 (-) |
| G424808 | NA | other | downstream | 236091 | 10444355 ~ 10542665 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | downstream | 614426 | 10160458 ~ 10163762 (-) |
| CI01000304_09737662_09738777 | NA | other | downstream | 1039285 | 9736746 ~ 9738777 (-) |
| CI01000304_09566730_09575706 | NA | other | downstream | 1209722 | 9566730 ~ 9575706 (-) |
| CI01000304_11338304_11348212 | ILK | other | upstream | 561763 | 11338019 ~ 11348212 (-) |
| G425580 | NA | other | upstream | 1083420 | 11868677 ~ 11872906 (-) |
| G426106 | NA | other | upstream | 1551444 | 12336701 ~ 12340228 (-) |
| CI01000304_12559311_12559998 | NA | other | upstream | 1773597 | 12558854 ~ 12560135 (-) |
| G426147 | NA | other | upstream | 1910741 | 12719497 ~ 12805926 (-) |
