G424790


Basic Information

Item Value
gene id G424790
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10837185 ~ 10837475 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU487789
GCAAAGTTTTTTTTCTAATACAACGTTATCGTGAGAAGGCGGAGCATAAGAGAACAACGGAGCTATAATGAACACACGTTCTAATTATGTGTGTATTAGAGGTTGAATTCAAATTAAATACTGCCAAACTGCCCATACTACTTCTGAATAGGATGTCTACTTCATAAAATGTATGAAAATATGGAAATATATGGTTCAGATCACTCAAATAAATGGAGGCGCCCTTAAATGGTAAGCTTGGGTGTCGTCTTGTGAAAAAGTTTGGTACTGCGCTCAAACAAAATCTTACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU487789 True 291 lncRNA 0.36 1 10837185 10837475

Neighbor

gene id symbol gene type direction distance location
CI01000304_10586097_10589143 NA coding upstream 247577 10585348 ~ 10589608 (+)
CI01000304_10577811_10579298 NA coding upstream 256648 10577701 ~ 10580537 (+)
CI01000304_10555326_10571933 NA coding upstream 265021 10555216 ~ 10572164 (+)
CI01000304_10550477_10551812 NA coding upstream 284445 10550268 ~ 10552740 (+)
CI01000304_10541900_10546151 NA coding upstream 290976 10535842 ~ 10546209 (+)
CI01000304_10927170_10992558 NA coding downstream 89695 10927170 ~ 10992558 (+)
CI01000304_11011297_11032025 NA coding downstream 172103 11009578 ~ 11032086 (+)
CI01000304_11140964_11155540 PAXBP1 coding downstream 303489 11140964 ~ 11155892 (+)
CI01000304_11170412_11182604 SLC7A1 coding downstream 332391 11169866 ~ 11182641 (+)
CI01000304_11215537_11253484 MTUS2A coding downstream 377462 11214937 ~ 11253581 (+)
G424547 NA non-coding upstream 258932 10532246 ~ 10543770 (+)
CI01000304_10528999_10530630 NA non-coding upstream 306384 10525290 ~ 10530847 (+)
CI01000304_10451536_10470518 CD209 non-coding upstream 376517 10450410 ~ 10471255 (+)
G424376 NA non-coding upstream 583913 10253047 ~ 10253272 (+)
G424366 NA non-coding upstream 593972 10242979 ~ 10243213 (+)
G424794 NA non-coding downstream 12835 10850310 ~ 10850575 (+)
G424936 NA non-coding downstream 227043 11064518 ~ 11065557 (+)
G425052 NA non-coding downstream 229017 11066492 ~ 11072156 (+)
G425058 NA non-coding downstream 234854 11072329 ~ 11072732 (+)
G425027 NA non-coding downstream 278645 11116120 ~ 11122174 (+)
G424251 NA other upstream 644290 10188822 ~ 10189404 (+)
G424246 NA other upstream 709863 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 1271612 9561005 ~ 9565778 (+)
G423614 NA other upstream 1887763 8949036 ~ 8949422 (+)
G425718 NA other downstream 1591230 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 2718976 13578049 ~ 13595097 (+)
G426312 NA other downstream 3492573 14330048 ~ 14330886 (+)
G426828 NA other downstream 4111415 14948890 ~ 14950592 (+)
G427860 NA other downstream 5047979 15885454 ~ 15889591 (+)

Expression


Co-expression Network