G424794


Basic Information

Item Value
gene id G424794
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10850310 ~ 10850575 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU487793
TACAAAGAGCCTGAAAGTCCTGATTGCATACCCAAAAGATGACAATAATAATAAAGAAAAACTCCAGGTGGTTTCAAACTATTGTTCAGAATAAAAAAAAAAAAAAACTGTTGAAACTCTCACAGGCTGTGTATGTCGAGTGAGTTTAATCCACACTGATGTCTGCTGCTATTCAAGGCACACACCCCATCACACTGTGCTTGTTCTCCCAGACCAAACAAGAGGCAGGTCGCCTTTGAAACCCTTTCTCCCTCCAAACCCCCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU487793 True 266 lncRNA 0.42 1 10850310 10850575

Neighbor

gene id symbol gene type direction distance location
CI01000304_10586097_10589143 NA coding upstream 260702 10585348 ~ 10589608 (+)
CI01000304_10577811_10579298 NA coding upstream 269773 10577701 ~ 10580537 (+)
CI01000304_10555326_10571933 NA coding upstream 278146 10555216 ~ 10572164 (+)
CI01000304_10550477_10551812 NA coding upstream 297570 10550268 ~ 10552740 (+)
CI01000304_10541900_10546151 NA coding upstream 304101 10535842 ~ 10546209 (+)
CI01000304_10927170_10992558 NA coding downstream 76595 10927170 ~ 10992558 (+)
CI01000304_11011297_11032025 NA coding downstream 159003 11009578 ~ 11032086 (+)
CI01000304_11140964_11155540 PAXBP1 coding downstream 290389 11140964 ~ 11155892 (+)
CI01000304_11170412_11182604 SLC7A1 coding downstream 319291 11169866 ~ 11182641 (+)
CI01000304_11215537_11253484 MTUS2A coding downstream 364362 11214937 ~ 11253581 (+)
G424790 NA non-coding upstream 12835 10837185 ~ 10837475 (+)
G424547 NA non-coding upstream 272057 10532246 ~ 10543770 (+)
CI01000304_10528999_10530630 NA non-coding upstream 319509 10525290 ~ 10530847 (+)
CI01000304_10451536_10470518 CD209 non-coding upstream 389642 10450410 ~ 10471255 (+)
G424376 NA non-coding upstream 597038 10253047 ~ 10253272 (+)
G424936 NA non-coding downstream 213943 11064518 ~ 11065557 (+)
G425052 NA non-coding downstream 215917 11066492 ~ 11072156 (+)
G425058 NA non-coding downstream 221754 11072329 ~ 11072732 (+)
G425027 NA non-coding downstream 265545 11116120 ~ 11122174 (+)
G425073 NA non-coding downstream 286814 11137389 ~ 11137708 (+)
G424251 NA other upstream 657415 10188822 ~ 10189404 (+)
G424246 NA other upstream 722988 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 1284737 9561005 ~ 9565778 (+)
G423614 NA other upstream 1900888 8949036 ~ 8949422 (+)
G425718 NA other downstream 1578130 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 2705876 13578049 ~ 13595097 (+)
G426312 NA other downstream 3479473 14330048 ~ 14330886 (+)
G426828 NA other downstream 4098315 14948890 ~ 14950592 (+)
G427860 NA other downstream 5034879 15885454 ~ 15889591 (+)

Expression


Co-expression Network