G425104


Basic Information

Item Value
gene id G425104
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10934381 ~ 11001594 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488143
CTATATAGTTTGTAGCGTCTGGATAGATCCGGCTAGTCAATCAACGTTGGACATTTCAGAATGCTTTTAGCCTCCTGAACTGTGCATGTAAATCACGAATCGGCTCCGGCAAGTCCGGGACCAATTGCCCCATTGGCACCTTTGTTACCCCAGTAAAGAAAAACAGAACATATTCTCACCAGCTCCAGAGACTTCAAAGAGTCACCCTGGTGGGACTAAAGGTGATATGGTCACAGACACTGGCCACAACCCCAATACACACACACATACAGACACTCACAAACACGCATGGAGATTGTGAATGTACATTTATCCTCCAAATATGACTGTGCCAATATGTACCCGTCGCTGTATTTAAAGGTGCATGTATTTATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488143 True 376 lncRNA 0.45 2 10934381 11001594

Neighbor

gene id symbol gene type direction distance location
CI01000304_10812673_10812980 NA coding downstream 119143 10812533 ~ 10815238 (-)
CI01000304_10350748_10388571 CADM2A coding downstream 545779 10349869 ~ 10388602 (-)
CI01000304_10284509_10291314 NLE1, NLE1.S coding downstream 643067 10284509 ~ 10291314 (-)
CI01000304_10220812_10226103 NA coding downstream 708278 10219589 ~ 10226103 (-)
CI01000304_10209150_10210418 NA coding downstream 723490 10208635 ~ 10210891 (-)
CI01000304_11065581_11077156 NA coding upstream 63645 11065239 ~ 11077156 (-)
CI01000304_11083948_11091592 PITPNAB, PITPNA coding upstream 82244 11083838 ~ 11091592 (-)
CI01000304_11110559_11121354 SLC43A2B coding upstream 108869 11110463 ~ 11122171 (-)
CI01000304_11124801_11135838 NA coding upstream 122563 11124157 ~ 11137342 (-)
CI01000304_11272501_11275583 STOM, STOML3B, STOML3 coding upstream 270630 11272224 ~ 11275583 (-)
G424932 NA non-coding downstream 34480 10899107 ~ 10899901 (-)
G424907 NA non-coding downstream 84898 10849201 ~ 10849483 (-)
G424818 NA non-coding downstream 111732 10769715 ~ 10822649 (-)
G425126 NA non-coding upstream 135783 11137377 ~ 11137710 (-)
G425167 NA non-coding upstream 138320 11139914 ~ 11140117 (-)
G425168 NA non-coding upstream 140093 11141687 ~ 11141959 (-)
G425188 NA non-coding upstream 204028 11205622 ~ 11257296 (-)
G425190 NA non-coding upstream 204322 11205916 ~ 11251704 (-)
G424808 NA other downstream 391716 10444355 ~ 10542665 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other downstream 741486 10190574 ~ 10192357 (-)
CI01000304_10160458_10161768 VAMP2 other downstream 770051 10160458 ~ 10163762 (-)
CI01000304_09737662_09738777 NA other downstream 1194910 9736746 ~ 9738777 (-)
CI01000304_09566730_09575706 NA other downstream 1365347 9566730 ~ 9575706 (-)
CI01000304_11338304_11348212 ILK other upstream 345426 11338019 ~ 11348212 (-)
G425580 NA other upstream 867083 11868677 ~ 11872906 (-)
G426106 NA other upstream 1335107 12336701 ~ 12340228 (-)
CI01000304_12559311_12559998 NA other upstream 1557260 12558854 ~ 12560135 (-)
G426147 NA other upstream 1694404 12719497 ~ 12805926 (-)

Expression


Co-expression Network