Gene
RNA
| Item | Value |
|---|---|
| gene id | G424936 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 11064518 ~ 11065557 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU487943 | True | 1040 | lncRNA | 0.33 | 1 | 11064518 | 11065557 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_11011297_11032025 | NA | coding | upstream | 32432 | 11009578 ~ 11032086 (+) |
| CI01000304_10927170_10992558 | NA | coding | upstream | 71960 | 10927170 ~ 10992558 (+) |
| CI01000304_10586097_10589143 | NA | coding | upstream | 474910 | 10585348 ~ 10589608 (+) |
| CI01000304_10577811_10579298 | NA | coding | upstream | 483981 | 10577701 ~ 10580537 (+) |
| CI01000304_10555326_10571933 | NA | coding | upstream | 492354 | 10555216 ~ 10572164 (+) |
| CI01000304_11140964_11155540 | PAXBP1 | coding | downstream | 75407 | 11140964 ~ 11155892 (+) |
| CI01000304_11170412_11182604 | SLC7A1 | coding | downstream | 104309 | 11169866 ~ 11182641 (+) |
| CI01000304_11215537_11253484 | MTUS2A | coding | downstream | 149380 | 11214937 ~ 11253581 (+) |
| CI01000304_11264394_11268134 | SLC46A3 | coding | downstream | 198837 | 11264394 ~ 11268134 (+) |
| CI01000304_11288992_11297645 | VPS36 | coding | downstream | 223435 | 11288992 ~ 11298149 (+) |
| G424794 | NA | non-coding | upstream | 213943 | 10850310 ~ 10850575 (+) |
| G424790 | NA | non-coding | upstream | 227043 | 10837185 ~ 10837475 (+) |
| G424547 | NA | non-coding | upstream | 486265 | 10532246 ~ 10543770 (+) |
| CI01000304_10528999_10530630 | NA | non-coding | upstream | 533717 | 10525290 ~ 10530847 (+) |
| CI01000304_10451536_10470518 | CD209 | non-coding | upstream | 603850 | 10450410 ~ 10471255 (+) |
| G425052 | NA | non-coding | downstream | 935 | 11066492 ~ 11072156 (+) |
| G425058 | NA | non-coding | downstream | 6772 | 11072329 ~ 11072732 (+) |
| G425027 | NA | non-coding | downstream | 50563 | 11116120 ~ 11122174 (+) |
| G425073 | NA | non-coding | downstream | 71832 | 11137389 ~ 11137708 (+) |
| G425048 | NA | non-coding | downstream | 126628 | 11192185 ~ 11209025 (+) |
| G424251 | NA | other | upstream | 871623 | 10188822 ~ 10189404 (+) |
| G424246 | NA | other | upstream | 937196 | 10116343 ~ 10127322 (+) |
| CI01000304_09564068_09565679 | HRH2B | other | upstream | 1498945 | 9561005 ~ 9565778 (+) |
| G423614 | NA | other | upstream | 2115096 | 8949036 ~ 8949422 (+) |
| G425718 | NA | other | downstream | 1363148 | 12436554 ~ 12436605 (+) |
| CI01000304_13578347_13595075 | NA | other | downstream | 2490894 | 13578049 ~ 13595097 (+) |
| G426312 | NA | other | downstream | 3264491 | 14330048 ~ 14330886 (+) |
| G426828 | NA | other | downstream | 3883333 | 14948890 ~ 14950592 (+) |
| G427860 | NA | other | downstream | 4819897 | 15885454 ~ 15889591 (+) |
