Gene
RNA
| Item | Value |
|---|---|
| gene id | G425168 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 11141687 ~ 11141959 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU488210 | True | 273 | lncRNA | 0.48 | 1 | 11141687 | 11141959 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_11124801_11135838 | NA | coding | downstream | 4345 | 11124157 ~ 11137342 (-) |
| CI01000304_11110559_11121354 | SLC43A2B | coding | downstream | 19516 | 11110463 ~ 11122171 (-) |
| CI01000304_11083948_11091592 | PITPNAB, PITPNA | coding | downstream | 50095 | 11083838 ~ 11091592 (-) |
| CI01000304_11065581_11077156 | NA | coding | downstream | 64531 | 11065239 ~ 11077156 (-) |
| CI01000304_10812673_10812980 | NA | coding | downstream | 326449 | 10812533 ~ 10815238 (-) |
| CI01000304_11272501_11275583 | STOM, STOML3B, STOML3 | coding | upstream | 130265 | 11272224 ~ 11275583 (-) |
| CI01000304_11282245_11288087 | PROSER1 | coding | upstream | 140182 | 11282141 ~ 11288087 (-) |
| CI01000304_11304660_11306789 | NA | coding | upstream | 162601 | 11304560 ~ 11306871 (-) |
| CI01000304_11330383_11335607 | SMPD1 | coding | upstream | 187683 | 11329642 ~ 11336120 (-) |
| CI01000304_11338304_11348212 | ILK | coding | upstream | 196060 | 11338019 ~ 11348212 (-) |
| G425167 | NA | non-coding | downstream | 1570 | 11139914 ~ 11140117 (-) |
| G425126 | NA | non-coding | downstream | 3977 | 11137377 ~ 11137710 (-) |
| G425104 | NA | non-coding | downstream | 140093 | 10934381 ~ 11001594 (-) |
| G424932 | NA | non-coding | downstream | 241786 | 10899107 ~ 10899901 (-) |
| G424907 | NA | non-coding | downstream | 292204 | 10849201 ~ 10849483 (-) |
| G425188 | NA | non-coding | upstream | 63663 | 11205622 ~ 11257296 (-) |
| G425190 | NA | non-coding | upstream | 63957 | 11205916 ~ 11251704 (-) |
| G425215 | NA | non-coding | upstream | 81409 | 11223368 ~ 11224952 (-) |
| G425222 | NA | non-coding | upstream | 89131 | 11231090 ~ 11233028 (-) |
| G425187 | NA | non-coding | upstream | 103223 | 11245182 ~ 11250211 (-) |
| G424808 | NA | other | downstream | 599022 | 10444355 ~ 10542665 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | downstream | 948792 | 10190574 ~ 10192357 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | downstream | 977357 | 10160458 ~ 10163762 (-) |
| CI01000304_09737662_09738777 | NA | other | downstream | 1402216 | 9736746 ~ 9738777 (-) |
| CI01000304_09566730_09575706 | NA | other | downstream | 1572653 | 9566730 ~ 9575706 (-) |
| G425580 | NA | other | upstream | 726718 | 11868677 ~ 11872906 (-) |
| G426106 | NA | other | upstream | 1194742 | 12336701 ~ 12340228 (-) |
| CI01000304_12559311_12559998 | NA | other | upstream | 1416895 | 12558854 ~ 12560135 (-) |
| G426147 | NA | other | upstream | 1554039 | 12719497 ~ 12805926 (-) |
