Gene
RNA
| Item | Value |
|---|---|
| gene id | G425222 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 11231090 ~ 11233028 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU488276 | True | 295 | lncRNA | 0.42 | 2 | 11231090 | 11233028 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_11124801_11135838 | NA | coding | downstream | 93748 | 11124157 ~ 11137342 (-) |
| CI01000304_11110559_11121354 | SLC43A2B | coding | downstream | 108919 | 11110463 ~ 11122171 (-) |
| CI01000304_11083948_11091592 | PITPNAB, PITPNA | coding | downstream | 139498 | 11083838 ~ 11091592 (-) |
| CI01000304_11065581_11077156 | NA | coding | downstream | 153934 | 11065239 ~ 11077156 (-) |
| CI01000304_10812673_10812980 | NA | coding | downstream | 415852 | 10812533 ~ 10815238 (-) |
| CI01000304_11272501_11275583 | STOM, STOML3B, STOML3 | coding | upstream | 39196 | 11272224 ~ 11275583 (-) |
| CI01000304_11282245_11288087 | PROSER1 | coding | upstream | 49113 | 11282141 ~ 11288087 (-) |
| CI01000304_11304660_11306789 | NA | coding | upstream | 71532 | 11304560 ~ 11306871 (-) |
| CI01000304_11330383_11335607 | SMPD1 | coding | upstream | 96614 | 11329642 ~ 11336120 (-) |
| CI01000304_11338304_11348212 | ILK | coding | upstream | 104991 | 11338019 ~ 11348212 (-) |
| G425215 | NA | non-coding | downstream | 6138 | 11223368 ~ 11224952 (-) |
| G425168 | NA | non-coding | downstream | 89131 | 11141687 ~ 11141959 (-) |
| G425167 | NA | non-coding | downstream | 90973 | 11139914 ~ 11140117 (-) |
| G425126 | NA | non-coding | downstream | 93380 | 11137377 ~ 11137710 (-) |
| G425104 | NA | non-coding | downstream | 229496 | 10934381 ~ 11001594 (-) |
| G425187 | NA | non-coding | upstream | 12154 | 11245182 ~ 11250211 (-) |
| G425228 | NA | non-coding | upstream | 33298 | 11266326 ~ 11267097 (-) |
| G425229 | NA | non-coding | upstream | 35169 | 11268197 ~ 11268449 (-) |
| G425230 | NA | non-coding | upstream | 36157 | 11269185 ~ 11270488 (-) |
| G425204 | NA | non-coding | upstream | 47948 | 11280976 ~ 11281204 (-) |
| G424808 | NA | other | downstream | 688425 | 10444355 ~ 10542665 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | downstream | 1038195 | 10190574 ~ 10192357 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | downstream | 1066760 | 10160458 ~ 10163762 (-) |
| CI01000304_09737662_09738777 | NA | other | downstream | 1491619 | 9736746 ~ 9738777 (-) |
| CI01000304_09566730_09575706 | NA | other | downstream | 1662056 | 9566730 ~ 9575706 (-) |
| G425580 | NA | other | upstream | 635649 | 11868677 ~ 11872906 (-) |
| G426106 | NA | other | upstream | 1103673 | 12336701 ~ 12340228 (-) |
| CI01000304_12559311_12559998 | NA | other | upstream | 1325826 | 12558854 ~ 12560135 (-) |
| G426147 | NA | other | upstream | 1462970 | 12719497 ~ 12805926 (-) |
