Gene
RNA
| Item | Value |
|---|---|
| gene id | G425204 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 11280976 ~ 11281204 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU488258 | True | 229 | lncRNA | 0.40 | 1 | 11280976 | 11281204 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_11272501_11275583 | STOM, STOML3B, STOML3 | coding | downstream | 5393 | 11272224 ~ 11275583 (-) |
| CI01000304_11124801_11135838 | NA | coding | downstream | 143634 | 11124157 ~ 11137342 (-) |
| CI01000304_11110559_11121354 | SLC43A2B | coding | downstream | 158805 | 11110463 ~ 11122171 (-) |
| CI01000304_11083948_11091592 | PITPNAB, PITPNA | coding | downstream | 189384 | 11083838 ~ 11091592 (-) |
| CI01000304_11065581_11077156 | NA | coding | downstream | 203820 | 11065239 ~ 11077156 (-) |
| CI01000304_11282245_11288087 | PROSER1 | coding | upstream | 937 | 11282141 ~ 11288087 (-) |
| CI01000304_11304660_11306789 | NA | coding | upstream | 23356 | 11304560 ~ 11306871 (-) |
| CI01000304_11330383_11335607 | SMPD1 | coding | upstream | 48438 | 11329642 ~ 11336120 (-) |
| CI01000304_11338304_11348212 | ILK | coding | upstream | 56815 | 11338019 ~ 11348212 (-) |
| CI01000304_11359135_11362408 | NA | coding | upstream | 77713 | 11358917 ~ 11362408 (-) |
| G425230 | NA | non-coding | downstream | 10488 | 11269185 ~ 11270488 (-) |
| G425229 | NA | non-coding | downstream | 12527 | 11268197 ~ 11268449 (-) |
| G425228 | NA | non-coding | downstream | 13879 | 11266326 ~ 11267097 (-) |
| G425187 | NA | non-coding | downstream | 30765 | 11245182 ~ 11250211 (-) |
| G425222 | NA | non-coding | downstream | 47948 | 11231090 ~ 11233028 (-) |
| G425269 | NA | non-coding | upstream | 148413 | 11429617 ~ 11430150 (-) |
| G425479 | NA | non-coding | upstream | 166423 | 11447627 ~ 11447954 (-) |
| G425517 | NA | non-coding | upstream | 298027 | 11579231 ~ 11579432 (-) |
| G425533 | NA | non-coding | upstream | 317685 | 11598889 ~ 11599266 (-) |
| G425559 | NA | non-coding | upstream | 391158 | 11672362 ~ 11672698 (-) |
| G424808 | NA | other | downstream | 738311 | 10444355 ~ 10542665 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | downstream | 1088081 | 10190574 ~ 10192357 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | downstream | 1116646 | 10160458 ~ 10163762 (-) |
| CI01000304_09737662_09738777 | NA | other | downstream | 1541505 | 9736746 ~ 9738777 (-) |
| CI01000304_09566730_09575706 | NA | other | downstream | 1711942 | 9566730 ~ 9575706 (-) |
| G425580 | NA | other | upstream | 587473 | 11868677 ~ 11872906 (-) |
| G426106 | NA | other | upstream | 1055497 | 12336701 ~ 12340228 (-) |
| CI01000304_12559311_12559998 | NA | other | upstream | 1277650 | 12558854 ~ 12560135 (-) |
| G426147 | NA | other | upstream | 1414794 | 12719497 ~ 12805926 (-) |
