Gene
RNA
| Item | Value |
|---|---|
| gene id | G425479 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 11447627 ~ 11447954 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU488564 | True | 328 | lncRNA | 0.34 | 1 | 11447627 | 11447954 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_11445002_11447156 | NA | coding | downstream | 471 | 11443731 ~ 11447156 (-) |
| CI01000304_11368905_11374145 | NA | coding | downstream | 73482 | 11368859 ~ 11374145 (-) |
| CI01000304_11359135_11362408 | NA | coding | downstream | 85219 | 11358917 ~ 11362408 (-) |
| CI01000304_11338304_11348212 | ILK | coding | downstream | 99415 | 11338019 ~ 11348212 (-) |
| CI01000304_11330383_11335607 | SMPD1 | coding | downstream | 111507 | 11329642 ~ 11336120 (-) |
| CI01000304_11479874_11503083 | MTNR1B, MTNR1BB | coding | upstream | 31716 | 11479670 ~ 11503494 (-) |
| CI01000304_11526057_11569114 | NA | coding | upstream | 78045 | 11525999 ~ 11569114 (-) |
| CI01000304_11575414_11578638 | NA | coding | upstream | 127374 | 11575328 ~ 11578638 (-) |
| CI01000304_11638983_11647850 | TMEM135 | coding | upstream | 190459 | 11638413 ~ 11649085 (-) |
| CI01000304_11654405_11655792 | NA | coding | upstream | 205981 | 11653935 ~ 11656016 (-) |
| G425269 | NA | non-coding | downstream | 17477 | 11429617 ~ 11430150 (-) |
| G425204 | NA | non-coding | downstream | 166423 | 11280976 ~ 11281204 (-) |
| G425230 | NA | non-coding | downstream | 177139 | 11269185 ~ 11270488 (-) |
| G425229 | NA | non-coding | downstream | 179178 | 11268197 ~ 11268449 (-) |
| G425228 | NA | non-coding | downstream | 180530 | 11266326 ~ 11267097 (-) |
| G425517 | NA | non-coding | upstream | 131277 | 11579231 ~ 11579432 (-) |
| G425533 | NA | non-coding | upstream | 150935 | 11598889 ~ 11599266 (-) |
| G425559 | NA | non-coding | upstream | 224408 | 11672362 ~ 11672698 (-) |
| G425549 | NA | non-coding | upstream | 248640 | 11696594 ~ 11698398 (-) |
| G425550 | NA | non-coding | upstream | 253210 | 11701164 ~ 11703380 (-) |
| G424808 | NA | other | downstream | 904962 | 10444355 ~ 10542665 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | downstream | 1254732 | 10190574 ~ 10192357 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | downstream | 1283297 | 10160458 ~ 10163762 (-) |
| CI01000304_09737662_09738777 | NA | other | downstream | 1708156 | 9736746 ~ 9738777 (-) |
| G425580 | NA | other | upstream | 420723 | 11868677 ~ 11872906 (-) |
| G426106 | NA | other | upstream | 888747 | 12336701 ~ 12340228 (-) |
| CI01000304_12559311_12559998 | NA | other | upstream | 1110900 | 12558854 ~ 12560135 (-) |
| G426147 | NA | other | upstream | 1248044 | 12719497 ~ 12805926 (-) |
| G427057 | NA | other | upstream | 2059687 | 13507641 ~ 13507922 (-) |
