G425533



Basic Information


Item Value
gene id G425533
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11598889 ~ 11599266 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU488636
GATGGATGGATGAATTAACTGAATGAATAGACAGAATGAAAGATGGGTGGATGGATGGATGACTGGATTGATGAATAATCGACAACTGCATGGATGATGAATAGCTGAATGAATTGATTGAATAAAATACTAATGTATAGATGGGTGGATGGATGGATGGATGTTATAGATAGATGGATGGATGAATGAATGATGAATAGATGGAATGAAAGATGGATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU488636 True 219 lncRNA 0.36 2 11598889 11599266

Neighbor


gene id symbol gene type direction distance location
CI01000304_11575414_11578638 NA coding downstream 20251 11575328 ~ 11578638 (-)
CI01000304_11526057_11569114 NA coding downstream 29775 11525999 ~ 11569114 (-)
CI01000304_11479874_11503083 MTNR1B, MTNR1BB coding downstream 95395 11479670 ~ 11503494 (-)
CI01000304_11445002_11447156 NA coding downstream 151733 11443731 ~ 11447156 (-)
CI01000304_11368905_11374145 NA coding downstream 224744 11368859 ~ 11374145 (-)
CI01000304_11638983_11647850 TMEM135 coding upstream 39147 11638413 ~ 11649085 (-)
CI01000304_11654405_11655792 NA coding upstream 54669 11653935 ~ 11656016 (-)
CI01000304_11665326_11670757 CCT8 coding upstream 65993 11665259 ~ 11670960 (-)
CI01000304_11706322_11747949 GRIK1B, GRIK1, GRIK2, GRIK1A coding upstream 106949 11706215 ~ 11747949 (-)
CI01000304_11769604_11771720 NA coding upstream 170276 11769542 ~ 11771720 (-)
G425517 NA non-coding downstream 19457 11579231 ~ 11579432 (-)
G425479 NA non-coding downstream 150935 11447627 ~ 11447954 (-)
G425269 NA non-coding downstream 168739 11429617 ~ 11430150 (-)
G425204 NA non-coding downstream 317685 11280976 ~ 11281204 (-)
G425230 NA non-coding downstream 328401 11269185 ~ 11270488 (-)
G425559 NA non-coding upstream 73096 11672362 ~ 11672698 (-)
G425549 NA non-coding upstream 97328 11696594 ~ 11698398 (-)
G425550 NA non-coding upstream 101898 11701164 ~ 11703380 (-)
G425582 NA non-coding upstream 291694 11890960 ~ 11891233 (-)
G425992 NA non-coding upstream 385351 11984617 ~ 11984915 (-)
CI01000304_11338304_11348212 ILK other downstream 241743 11338019 ~ 11348212 (-)
G424808 NA other downstream 1056224 10444355 ~ 10542665 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other downstream 1405994 10190574 ~ 10192357 (-)
CI01000304_10160458_10161768 VAMP2 other downstream 1434559 10160458 ~ 10163762 (-)
CI01000304_09737662_09738777 NA other downstream 1859418 9736746 ~ 9738777 (-)
G425580 NA other upstream 269411 11868677 ~ 11872906 (-)
G426106 NA other upstream 737435 12336701 ~ 12340228 (-)
CI01000304_12559311_12559998 NA other upstream 959588 12558854 ~ 12560135 (-)
G426147 NA other upstream 1096732 12719497 ~ 12805926 (-)
G427057 NA other upstream 1908375 13507641 ~ 13507922 (-)

Expression



Co-expression Network