G425358


Basic Information

Item Value
gene id G425358
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11624220 ~ 11624518 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488426
ATGGACCAAGTTTGGTCTGAATACGATAAAGCGTTGAGGAGATAGAGCCTTAAGTCTATTTTCACAAGCGCTACGTATAATTCGTTCGCACGTTTTTCTAAAACGGTTTGACAAATCAACCTGGATTCCACAACTTTTTGTTGACATGGTCTAAAGATTATCCGGTTCAATTTTCGTGAAGGAGGAGTTCAGTATGTAAAAGTATGTTTTTTTTGGAAAATTCAATATTGCGGGAAAATTTTCATGACGGAAAATGACGTTGTGGGTGCAATCGAATCGTCTTGAGTCAAGGAATCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488426 True 299 lncRNA 0.38 1 11624220 11624518

Neighbor

gene id symbol gene type direction distance location
CI01000304_11613446_11620345 RAB38 coding upstream 3657 11613446 ~ 11620563 (+)
CI01000304_11582257_11610398 GRM5, GRM5A coding upstream 13609 11581808 ~ 11610611 (+)
CI01000304_11570457_11574856 CHORDC1 coding upstream 48930 11570457 ~ 11575290 (+)
CI01000304_11449463_11453214 NA coding upstream 170905 11448966 ~ 11453315 (+)
CI01000304_11323923_11325889 NA coding upstream 298315 11322230 ~ 11325905 (+)
CI01000304_11676155_11681977 MAP3K7CL coding downstream 51637 11676155 ~ 11683131 (+)
CI01000304_11685224_11691071 NA coding downstream 60706 11685224 ~ 11691071 (+)
CI01000304_11812792_11817948 NA coding downstream 187996 11812514 ~ 11818413 (+)
CI01000304_11866424_11868022 UGT5D1 coding downstream 241582 11866100 ~ 11868083 (+)
CI01000304_11993486_12061098 FREM2, FREM2A coding downstream 368968 11993486 ~ 12062218 (+)
G425356 NA non-coding upstream 1211 11622805 ~ 11623009 (+)
G425354 NA non-coding upstream 2780 11621106 ~ 11621440 (+)
G425338 NA non-coding upstream 54349 11565954 ~ 11569871 (+)
G425317 NA non-coding upstream 97321 11514772 ~ 11526899 (+)
G425316 NA non-coding upstream 111519 11512489 ~ 11512701 (+)
G425359 NA non-coding downstream 73 11624591 ~ 11624842 (+)
G425361 NA non-coding downstream 1003 11625521 ~ 11625765 (+)
G425362 NA non-coding downstream 1566 11626084 ~ 11626301 (+)
G425363 NA non-coding downstream 1790 11626308 ~ 11626602 (+)
G425364 NA non-coding downstream 4345 11628863 ~ 11629178 (+)
CI01000304_10555326_10571933 NA other upstream 1068516 10555216 ~ 10572164 (+)
G424251 NA other upstream 1431325 10188822 ~ 10189404 (+)
G424246 NA other upstream 1496898 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2058647 9561005 ~ 9565778 (+)
G423614 NA other upstream 2674798 8949036 ~ 8949422 (+)
G425718 NA other downstream 804187 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 1931933 13578049 ~ 13595097 (+)
G426312 NA other downstream 2705530 14330048 ~ 14330886 (+)
G426828 NA other downstream 3324372 14948890 ~ 14950592 (+)
G427860 NA other downstream 4260936 15885454 ~ 15889591 (+)

Expression


Co-expression Network