G425394


Basic Information

Item Value
gene id G425394
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11673994 ~ 11674204 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488464
TGCCGCTTCAAAGGGCTCTACATGATCCCAGCCGAGGAATAAGGGTCTTATCTAGCGAAACGATTGGTCATTTTCTAAAAAAAAATAAAAACTTATATACTATTTAACCACAAATGCTCGTCCTGCACTGCTCTGCGATCCGCCACACATTTTGTAATCACATTGGAAAGGTCACGCATGATGAAGGCGGAAGTACCGCGGTAGGGCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488464 True 211 lncRNA 0.44 1 11673994 11674204

Neighbor

gene id symbol gene type direction distance location
CI01000304_11613446_11620345 RAB38 coding upstream 53431 11613446 ~ 11620563 (+)
CI01000304_11582257_11610398 GRM5, GRM5A coding upstream 63383 11581808 ~ 11610611 (+)
CI01000304_11570457_11574856 CHORDC1 coding upstream 98704 11570457 ~ 11575290 (+)
CI01000304_11449463_11453214 NA coding upstream 220679 11448966 ~ 11453315 (+)
CI01000304_11323923_11325889 NA coding upstream 348089 11322230 ~ 11325905 (+)
CI01000304_11676155_11681977 MAP3K7CL coding downstream 1951 11676155 ~ 11683131 (+)
CI01000304_11685224_11691071 NA coding downstream 11020 11685224 ~ 11691071 (+)
CI01000304_11812792_11817948 NA coding downstream 138310 11812514 ~ 11818413 (+)
CI01000304_11866424_11868022 UGT5D1 coding downstream 191896 11866100 ~ 11868083 (+)
CI01000304_11993486_12061098 FREM2, FREM2A coding downstream 319282 11993486 ~ 12062218 (+)
G425393 NA non-coding upstream 11712 11662026 ~ 11662282 (+)
G425392 NA non-coding upstream 11995 11661766 ~ 11661999 (+)
G425370 NA non-coding upstream 24765 11648993 ~ 11649229 (+)
G425367 NA non-coding upstream 40734 11632884 ~ 11633260 (+)
G425366 NA non-coding upstream 43500 11630195 ~ 11630494 (+)
G425385 NA non-coding downstream 63479 11737683 ~ 11744622 (+)
G425435 NA non-coding downstream 162108 11836312 ~ 11836603 (+)
G425441 NA non-coding downstream 167580 11841784 ~ 11842239 (+)
G425442 NA non-coding downstream 169721 11843925 ~ 11844141 (+)
G425443 NA non-coding downstream 170027 11844231 ~ 11844535 (+)
CI01000304_10555326_10571933 NA other upstream 1118290 10555216 ~ 10572164 (+)
G424251 NA other upstream 1481099 10188822 ~ 10189404 (+)
G424246 NA other upstream 1546672 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2108421 9561005 ~ 9565778 (+)
G423614 NA other upstream 2724572 8949036 ~ 8949422 (+)
G425718 NA other downstream 754501 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 1882247 13578049 ~ 13595097 (+)
G426312 NA other downstream 2655844 14330048 ~ 14330886 (+)
G426828 NA other downstream 3274686 14948890 ~ 14950592 (+)
G427860 NA other downstream 4211250 15885454 ~ 15889591 (+)

Expression


Co-expression Network