Gene
RNA
| Item | Value |
|---|---|
| gene id | G425441 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 11841784 ~ 11842239 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU488525 | True | 456 | lncRNA | 0.43 | 1 | 11841784 | 11842239 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_11812792_11817948 | NA | coding | upstream | 23371 | 11812514 ~ 11818413 (+) |
| CI01000304_11685224_11691071 | NA | coding | upstream | 150713 | 11685224 ~ 11691071 (+) |
| CI01000304_11676155_11681977 | MAP3K7CL | coding | upstream | 158653 | 11676155 ~ 11683131 (+) |
| CI01000304_11613446_11620345 | RAB38 | coding | upstream | 221221 | 11613446 ~ 11620563 (+) |
| CI01000304_11582257_11610398 | GRM5, GRM5A | coding | upstream | 231173 | 11581808 ~ 11610611 (+) |
| CI01000304_11866424_11868022 | UGT5D1 | coding | downstream | 23861 | 11866100 ~ 11868083 (+) |
| CI01000304_11993486_12061098 | FREM2, FREM2A | coding | downstream | 151247 | 11993486 ~ 12062218 (+) |
| CI01000304_12065676_12071391 | TRIM47 | coding | downstream | 222580 | 12064381 ~ 12071430 (+) |
| CI01000304_12213555_12231910 | NA | coding | downstream | 369815 | 12212054 ~ 12232732 (+) |
| CI01000304_12314575_12337592 | SYNJ1 | coding | downstream | 472077 | 12314316 ~ 12337690 (+) |
| G425435 | NA | non-coding | upstream | 5181 | 11836312 ~ 11836603 (+) |
| G425385 | NA | non-coding | upstream | 97162 | 11737683 ~ 11744622 (+) |
| G425394 | NA | non-coding | upstream | 167580 | 11673994 ~ 11674204 (+) |
| G425393 | NA | non-coding | upstream | 179502 | 11662026 ~ 11662282 (+) |
| G425392 | NA | non-coding | upstream | 179785 | 11661766 ~ 11661999 (+) |
| G425442 | NA | non-coding | downstream | 1686 | 11843925 ~ 11844141 (+) |
| G425443 | NA | non-coding | downstream | 1992 | 11844231 ~ 11844535 (+) |
| G425404 | NA | non-coding | downstream | 3304 | 11845543 ~ 11847015 (+) |
| G425447 | NA | non-coding | downstream | 9874 | 11852113 ~ 11853772 (+) |
| G425449 | NA | non-coding | downstream | 15390 | 11857629 ~ 11858050 (+) |
| CI01000304_10555326_10571933 | NA | other | upstream | 1286080 | 10555216 ~ 10572164 (+) |
| G424251 | NA | other | upstream | 1648889 | 10188822 ~ 10189404 (+) |
| G424246 | NA | other | upstream | 1714462 | 10116343 ~ 10127322 (+) |
| CI01000304_09564068_09565679 | HRH2B | other | upstream | 2276211 | 9561005 ~ 9565778 (+) |
| G423614 | NA | other | upstream | 2892362 | 8949036 ~ 8949422 (+) |
| G425718 | NA | other | downstream | 586466 | 12436554 ~ 12436605 (+) |
| CI01000304_13578347_13595075 | NA | other | downstream | 1714212 | 13578049 ~ 13595097 (+) |
| G426312 | NA | other | downstream | 2487809 | 14330048 ~ 14330886 (+) |
| G426828 | NA | other | downstream | 3106651 | 14948890 ~ 14950592 (+) |
| G427860 | NA | other | downstream | 4043215 | 15885454 ~ 15889591 (+) |
