G425443


Basic Information

Item Value
gene id G425443
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11844231 ~ 11844535 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488527
GTTTTATTTTTATTCCTATTTTGGCAGAATGCATCTGAGTAGAAGGCATAAAAACGTGTAACCATCAAACACGCATAGAGTATGAAATGTACATTGTGTAGACAGTAAAATAAGCACAATAAAGATGGTAAAAGGACAAAATGTGACATTTTTATCATCAAAAACATAAACATTCTGGGTGCAAATGTGGTATTTGAACTGTGAAACTCATCTGTAGGTTGCAGGTCTTCGTTCTCTGGGGAATCTCGTTTCGTCTGGAGAGGAAACTGGAAATGCCAAGTTTCTTCACATGGGAGGCTGCCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488527 True 305 lncRNA 0.38 1 11844231 11844535

Neighbor

gene id symbol gene type direction distance location
CI01000304_11812792_11817948 NA coding upstream 25818 11812514 ~ 11818413 (+)
CI01000304_11685224_11691071 NA coding upstream 153160 11685224 ~ 11691071 (+)
CI01000304_11676155_11681977 MAP3K7CL coding upstream 161100 11676155 ~ 11683131 (+)
CI01000304_11613446_11620345 RAB38 coding upstream 223668 11613446 ~ 11620563 (+)
CI01000304_11582257_11610398 GRM5, GRM5A coding upstream 233620 11581808 ~ 11610611 (+)
CI01000304_11866424_11868022 UGT5D1 coding downstream 21565 11866100 ~ 11868083 (+)
CI01000304_11993486_12061098 FREM2, FREM2A coding downstream 148951 11993486 ~ 12062218 (+)
CI01000304_12065676_12071391 TRIM47 coding downstream 220284 12064381 ~ 12071430 (+)
CI01000304_12213555_12231910 NA coding downstream 367519 12212054 ~ 12232732 (+)
CI01000304_12314575_12337592 SYNJ1 coding downstream 469781 12314316 ~ 12337690 (+)
G425442 NA non-coding upstream 90 11843925 ~ 11844141 (+)
G425441 NA non-coding upstream 1992 11841784 ~ 11842239 (+)
G425435 NA non-coding upstream 7628 11836312 ~ 11836603 (+)
G425385 NA non-coding upstream 99609 11737683 ~ 11744622 (+)
G425394 NA non-coding upstream 170027 11673994 ~ 11674204 (+)
G425404 NA non-coding downstream 1008 11845543 ~ 11847015 (+)
G425447 NA non-coding downstream 7578 11852113 ~ 11853772 (+)
G425449 NA non-coding downstream 13094 11857629 ~ 11858050 (+)
G425462 NA non-coding downstream 46398 11890933 ~ 11891233 (+)
G425466 NA non-coding downstream 77127 11921662 ~ 11921962 (+)
CI01000304_10555326_10571933 NA other upstream 1288527 10555216 ~ 10572164 (+)
G424251 NA other upstream 1651336 10188822 ~ 10189404 (+)
G424246 NA other upstream 1716909 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2278658 9561005 ~ 9565778 (+)
G423614 NA other upstream 2894809 8949036 ~ 8949422 (+)
G425718 NA other downstream 584170 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 1711916 13578049 ~ 13595097 (+)
G426312 NA other downstream 2485513 14330048 ~ 14330886 (+)
G426828 NA other downstream 3104355 14948890 ~ 14950592 (+)
G427860 NA other downstream 4040919 15885454 ~ 15889591 (+)

Expression


Co-expression Network