Gene
RNA
| Item | Value |
|---|---|
| gene id | G425992 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 11984617 ~ 11984915 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU489161 | True | 299 | lncRNA | 0.39 | 1 | 11984617 | 11984915 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_11924813_11936040 | TRPC4B, TRPC4, TRPC4A | coding | downstream | 48259 | 11924384 ~ 11936358 (-) |
| CI01000304_11897314_11913788 | POSTN, POSTNA | coding | downstream | 70778 | 11896479 ~ 11913839 (-) |
| CI01000304_11850324_11861609 | SCAF4, SCAF4A | coding | downstream | 123008 | 11849777 ~ 11861609 (-) |
| CI01000304_11845828_11848857 | SOD1 | coding | downstream | 135454 | 11845614 ~ 11849163 (-) |
| CI01000304_11773915_11805873 | TIAM1B, TIAM1 | coding | downstream | 176289 | 11772846 ~ 11808328 (-) |
| CI01000304_12076818_12085420 | TRIM3B, TRIM3A | coding | upstream | 91640 | 12076555 ~ 12085420 (-) |
| CI01000304_12111812_12118998 | NA | coding | upstream | 126604 | 12111519 ~ 12120243 (-) |
| CI01000304_12123700_12132292 | ARFIP2B, ARFIP2 | coding | upstream | 138494 | 12123409 ~ 12132506 (-) |
| CI01000304_12166589_12192298 | NA | coding | upstream | 181075 | 12165990 ~ 12192298 (-) |
| CI01000304_12249076_12249428 | NA | coding | upstream | 263651 | 12248566 ~ 12249722 (-) |
| G425582 | NA | non-coding | downstream | 93384 | 11890960 ~ 11891233 (-) |
| G425550 | NA | non-coding | downstream | 281237 | 11701164 ~ 11703380 (-) |
| G425549 | NA | non-coding | downstream | 286219 | 11696594 ~ 11698398 (-) |
| G425559 | NA | non-coding | downstream | 311919 | 11672362 ~ 11672698 (-) |
| G425533 | NA | non-coding | downstream | 385351 | 11598889 ~ 11599266 (-) |
| G425993 | NA | non-coding | upstream | 413 | 11985328 ~ 11985695 (-) |
| G426052 | NA | non-coding | upstream | 58543 | 12043458 ~ 12044561 (-) |
| G426061 | NA | non-coding | upstream | 79464 | 12064379 ~ 12065037 (-) |
| G426025 | NA | non-coding | upstream | 83113 | 12068028 ~ 12068400 (-) |
| G426065 | NA | non-coding | upstream | 119529 | 12104444 ~ 12104665 (-) |
| G425580 | NA | other | downstream | 111711 | 11868677 ~ 11872906 (-) |
| CI01000304_11338304_11348212 | ILK | other | downstream | 627471 | 11338019 ~ 11348212 (-) |
| G424808 | NA | other | downstream | 1441952 | 10444355 ~ 10542665 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | downstream | 1791722 | 10190574 ~ 10192357 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | downstream | 1820287 | 10160458 ~ 10163762 (-) |
| G426106 | NA | other | upstream | 351786 | 12336701 ~ 12340228 (-) |
| CI01000304_12559311_12559998 | NA | other | upstream | 573939 | 12558854 ~ 12560135 (-) |
| G426147 | NA | other | upstream | 711083 | 12719497 ~ 12805926 (-) |
| G427057 | NA | other | upstream | 1522726 | 13507641 ~ 13507922 (-) |
| G427154 | NA | other | upstream | 1946876 | 13931791 ~ 13950548 (-) |
