Gene
RNA
| Item | Value |
|---|---|
| gene id | G426052 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 12043458 ~ 12044561 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU489229 | True | 303 | lncRNA | 0.51 | 2 | 12043458 | 12044561 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_11924813_11936040 | TRPC4B, TRPC4, TRPC4A | coding | downstream | 107100 | 11924384 ~ 11936358 (-) |
| CI01000304_11897314_11913788 | POSTN, POSTNA | coding | downstream | 129619 | 11896479 ~ 11913839 (-) |
| CI01000304_11850324_11861609 | SCAF4, SCAF4A | coding | downstream | 181849 | 11849777 ~ 11861609 (-) |
| CI01000304_11845828_11848857 | SOD1 | coding | downstream | 194295 | 11845614 ~ 11849163 (-) |
| CI01000304_11773915_11805873 | TIAM1B, TIAM1 | coding | downstream | 235130 | 11772846 ~ 11808328 (-) |
| CI01000304_12076818_12085420 | TRIM3B, TRIM3A | coding | upstream | 31994 | 12076555 ~ 12085420 (-) |
| CI01000304_12111812_12118998 | NA | coding | upstream | 66958 | 12111519 ~ 12120243 (-) |
| CI01000304_12123700_12132292 | ARFIP2B, ARFIP2 | coding | upstream | 78848 | 12123409 ~ 12132506 (-) |
| CI01000304_12166589_12192298 | NA | coding | upstream | 121429 | 12165990 ~ 12192298 (-) |
| CI01000304_12249076_12249428 | NA | coding | upstream | 204005 | 12248566 ~ 12249722 (-) |
| G425993 | NA | non-coding | downstream | 57763 | 11985328 ~ 11985695 (-) |
| G425992 | NA | non-coding | downstream | 58543 | 11984617 ~ 11984915 (-) |
| G425582 | NA | non-coding | downstream | 152225 | 11890960 ~ 11891233 (-) |
| G425550 | NA | non-coding | downstream | 340078 | 11701164 ~ 11703380 (-) |
| G425549 | NA | non-coding | downstream | 345060 | 11696594 ~ 11698398 (-) |
| G426061 | NA | non-coding | upstream | 19818 | 12064379 ~ 12065037 (-) |
| G426025 | NA | non-coding | upstream | 23467 | 12068028 ~ 12068400 (-) |
| G426065 | NA | non-coding | upstream | 59883 | 12104444 ~ 12104665 (-) |
| G426071 | NA | non-coding | upstream | 100494 | 12145055 ~ 12145359 (-) |
| G426092 | NA | non-coding | upstream | 227227 | 12271788 ~ 12271991 (-) |
| G425580 | NA | other | downstream | 170552 | 11868677 ~ 11872906 (-) |
| CI01000304_11338304_11348212 | ILK | other | downstream | 686312 | 11338019 ~ 11348212 (-) |
| G424808 | NA | other | downstream | 1500793 | 10444355 ~ 10542665 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | downstream | 1850563 | 10190574 ~ 10192357 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | downstream | 1879128 | 10160458 ~ 10163762 (-) |
| G426106 | NA | other | upstream | 292140 | 12336701 ~ 12340228 (-) |
| CI01000304_12559311_12559998 | NA | other | upstream | 514293 | 12558854 ~ 12560135 (-) |
| G426147 | NA | other | upstream | 651437 | 12719497 ~ 12805926 (-) |
| G427057 | NA | other | upstream | 1463080 | 13507641 ~ 13507922 (-) |
| G427154 | NA | other | upstream | 1887230 | 13931791 ~ 13950548 (-) |
