Gene
RNA
| Item | Value |
|---|---|
| gene id | G426065 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 12104444 ~ 12104665 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU489243 | True | 222 | lncRNA | 0.32 | 1 | 12104444 | 12104665 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_12076818_12085420 | TRIM3B, TRIM3A | coding | downstream | 19024 | 12076555 ~ 12085420 (-) |
| CI01000304_11924813_11936040 | TRPC4B, TRPC4, TRPC4A | coding | downstream | 168086 | 11924384 ~ 11936358 (-) |
| CI01000304_11897314_11913788 | POSTN, POSTNA | coding | downstream | 190605 | 11896479 ~ 11913839 (-) |
| CI01000304_11850324_11861609 | SCAF4, SCAF4A | coding | downstream | 242835 | 11849777 ~ 11861609 (-) |
| CI01000304_11845828_11848857 | SOD1 | coding | downstream | 255281 | 11845614 ~ 11849163 (-) |
| CI01000304_12111812_12118998 | NA | coding | upstream | 6854 | 12111519 ~ 12120243 (-) |
| CI01000304_12123700_12132292 | ARFIP2B, ARFIP2 | coding | upstream | 18744 | 12123409 ~ 12132506 (-) |
| CI01000304_12166589_12192298 | NA | coding | upstream | 61325 | 12165990 ~ 12192298 (-) |
| CI01000304_12249076_12249428 | NA | coding | upstream | 143901 | 12248566 ~ 12249722 (-) |
| CI01000304_12254455_12256896 | DCHS1 | coding | upstream | 149447 | 12254112 ~ 12258111 (-) |
| G426025 | NA | non-coding | downstream | 36044 | 12068028 ~ 12068400 (-) |
| G426061 | NA | non-coding | downstream | 39407 | 12064379 ~ 12065037 (-) |
| G426052 | NA | non-coding | downstream | 59883 | 12043458 ~ 12044561 (-) |
| G425993 | NA | non-coding | downstream | 118749 | 11985328 ~ 11985695 (-) |
| G425992 | NA | non-coding | downstream | 119529 | 11984617 ~ 11984915 (-) |
| G426071 | NA | non-coding | upstream | 40390 | 12145055 ~ 12145359 (-) |
| G426092 | NA | non-coding | upstream | 167123 | 12271788 ~ 12271991 (-) |
| G426103 | NA | non-coding | upstream | 191891 | 12296556 ~ 12296831 (-) |
| G426016 | NA | non-coding | upstream | 208962 | 12313627 ~ 12316312 (-) |
| G426110 | NA | non-coding | upstream | 258053 | 12362718 ~ 12363607 (-) |
| G425580 | NA | other | downstream | 231538 | 11868677 ~ 11872906 (-) |
| CI01000304_11338304_11348212 | ILK | other | downstream | 747298 | 11338019 ~ 11348212 (-) |
| G424808 | NA | other | downstream | 1561779 | 10444355 ~ 10542665 (-) |
| CI01000304_10191594_10192287 | RNASEKB, RNASEK | other | downstream | 1911549 | 10190574 ~ 10192357 (-) |
| CI01000304_10160458_10161768 | VAMP2 | other | downstream | 1940114 | 10160458 ~ 10163762 (-) |
| G426106 | NA | other | upstream | 232036 | 12336701 ~ 12340228 (-) |
| CI01000304_12559311_12559998 | NA | other | upstream | 454189 | 12558854 ~ 12560135 (-) |
| G426147 | NA | other | upstream | 591333 | 12719497 ~ 12805926 (-) |
| G427057 | NA | other | upstream | 1402976 | 13507641 ~ 13507922 (-) |
| G427154 | NA | other | upstream | 1827126 | 13931791 ~ 13950548 (-) |
