G425765


Basic Information

Item Value
gene id G425765
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12300413 ~ 12300622 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488916
CTGTGTTTAACAAAGGGTTATGACGCTTACATGTTTTGTCTATCAAGATAATCTTTACAAGTTAACACAACATTTATACATTTTGAAGCCTAAATAAAGTCGTCAGATATAAAAAGCTAACAGTAGGCTATAAACGGACTACAGCACACCATGGTCGCGGATCAACGTCACCACCACCAAGCTTCCTCACACTTTATTTAAAAAACAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488916 True 210 lncRNA 0.36 1 12300413 12300622

Neighbor

gene id symbol gene type direction distance location
CI01000304_12213555_12231910 NA coding upstream 67681 12212054 ~ 12232732 (+)
CI01000304_12065676_12071391 TRIM47 coding upstream 228983 12064381 ~ 12071430 (+)
CI01000304_11993486_12061098 FREM2, FREM2A coding upstream 238195 11993486 ~ 12062218 (+)
CI01000304_11866424_11868022 UGT5D1 coding upstream 432330 11866100 ~ 11868083 (+)
CI01000304_11812792_11817948 NA coding upstream 482000 11812514 ~ 11818413 (+)
CI01000304_12314575_12337592 SYNJ1 coding downstream 13694 12314316 ~ 12337690 (+)
CI01000304_12340979_12347664 SLC9A6B coding downstream 39225 12339847 ~ 12347890 (+)
CI01000304_12353305_12359214 FHL1B coding downstream 52384 12353006 ~ 12359838 (+)
CI01000304_12362738_12374610 NA coding downstream 62116 12362738 ~ 12374610 (+)
CI01000304_12375591_12385064 HTATSF1 coding downstream 74969 12375591 ~ 12385120 (+)
G425666 NA non-coding upstream 43219 12255099 ~ 12257194 (+)
G425660 NA non-coding upstream 126354 12172882 ~ 12174059 (+)
G425635 NA non-coding upstream 184047 12111311 ~ 12116366 (+)
G425632 NA non-coding upstream 194835 12105340 ~ 12105578 (+)
G425764 NA non-coding downstream 1718 12302340 ~ 12302726 (+)
G425777 NA non-coding downstream 154559 12455181 ~ 12455395 (+)
G425778 NA non-coding downstream 154871 12455493 ~ 12455853 (+)
G425796 NA non-coding downstream 260452 12561074 ~ 12561425 (+)
CI01000304_12583384_12588591 WDR74 non-coding downstream 288299 12583384 ~ 12589788 (+)
CI01000304_10555326_10571933 NA other upstream 1744709 10555216 ~ 10572164 (+)
G424251 NA other upstream 2107518 10188822 ~ 10189404 (+)
G424246 NA other upstream 2173091 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2734840 9561005 ~ 9565778 (+)
G423614 NA other upstream 3350991 8949036 ~ 8949422 (+)
G425718 NA other downstream 128083 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 1255829 13578049 ~ 13595097 (+)
G426312 NA other downstream 2029426 14330048 ~ 14330886 (+)
G426828 NA other downstream 2648268 14948890 ~ 14950592 (+)
G427860 NA other downstream 3584832 15885454 ~ 15889591 (+)

Expression


Co-expression Network