G425718


Basic Information

Item Value
gene id G425718
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12436554 ~ 12436605 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488858
GGGGAACATGATATCTCAAAGGAGGAGGGAAAAGAGAGTGAACACACTGTAGCGGAGTGGCATATCCATCCAAATTACAACTCTCAACAGAGTGTTTACAATCATGACATCGCCCTGTTGAAGCTCAAGGGACCCGTCAAATTCTCAGACTACGCCCTGCCCATCTGCCTGGGCTCTAAAGACTTCACAGAGAACCTGCTCAAGAACGCGCAAAACTCCCAGGTGAGTGGCTGGGGAAGGCTACTGCACGGGGGCGTCGAATCCAAAACACTTCAGAAAGTAGAGCTCCCCTACGTGGACCGGACAGAGTGCAAAGGCAGCAGCACCTACGCCATCACCCGCTTCATGTTCTGTGCCGGTTACAGTACGGTACGCAAGGATTCCTGTCAGGGAGACAGTGGAGGACCCCATGCCACCCTCTTTCAGAACACATGGTTCCTCACGGGCATCGTCAGCTGGGGTGAAGAGTGCGCCAAAGAGGGAAACGTGTCTGGGGACCGGTCACCCTCACATACACAAGGACCACACAACCACTCGGTATAAATGGTAAAATGCAGGGAAAATGACCCACAAACACTGCAGGTGCAGGCTGAAAAAAGAAAAGAAAAAAAGAAAAAACACCCACCGGATGAGATATCTGTTTGCATGCAGTGCAAACAGATATGTCCTGAACTTTGGAGCAGATCATGAATGTATTTGGACTGTTGGGAGAGATTTCTGCCTGAGGGGGAAATCATCATAGAGAAAATGGTGAAGATTTATCCCATTATTTGGACATGCATTTTGCTGCTTGAAACTTGGCTAACATCTGAAGCTTCAGTGTTTCTGCCGAGGGAGCTGGCGGGGTCTCTTCTGAAGAGACAAAAACGCTTTAACTCAGGTATGTTTGAGGAGTTGAAGGCGGATAACTTGGAAAGGGAATGTATCGAAGAGCGCTGCAATCTAGAGGAGGCCAGAGAGTTCTTTGAAGACCATGAGCAAACCATGAAATTCTGGGCCACTTATATGGATGGAGACCAGTGTCAGTCATCTCCCTGTCAGAATGGTGGAAGATGTGAGGATGGTATGAATACATATACCTGCTGGTGTCCAACCCGCTTTAGTGGGAGGAACTGTGAGTTAGGTAAGATTTGGCATTATGTCTTCTATTTAAGACAACATAATTTATTTAAAAAATATGTCAAAATATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488858 True 52 TUCP 0.47 1 12436554 12436605

Neighbor

gene id symbol gene type direction distance location
CI01000304_12394477_12400175 TMTOPS3B coding upstream 28390 12393500 ~ 12400315 (+)
CI01000304_12385473_12389970 NA coding upstream 38178 12385473 ~ 12390527 (+)
CI01000304_12375591_12385064 HTATSF1 coding upstream 43585 12375591 ~ 12385120 (+)
CI01000304_12362738_12374610 NA coding upstream 54095 12362738 ~ 12374610 (+)
CI01000304_12353305_12359214 FHL1B coding upstream 68867 12353006 ~ 12359838 (+)
CI01000304_12468041_12473615 ARR3A coding downstream 28955 12468041 ~ 12473708 (+)
CI01000304_12478136_12484791 NA coding downstream 39050 12478136 ~ 12484978 (+)
CI01000304_12485748_12487703 SSSCA1 coding downstream 46662 12485748 ~ 12487763 (+)
CI01000304_12489630_12490940 FAM89B coding downstream 50496 12489582 ~ 12491500 (+)
CI01000304_12496984_12537562 EHBP1L1B, FRMD8 coding downstream 57793 12496879 ~ 12539153 (+)
G425764 NA non-coding upstream 125979 12302340 ~ 12302726 (+)
G425765 NA non-coding upstream 128083 12300413 ~ 12300622 (+)
G425666 NA non-coding upstream 171511 12255099 ~ 12257194 (+)
G425660 NA non-coding upstream 254646 12172882 ~ 12174059 (+)
G425635 NA non-coding upstream 312339 12111311 ~ 12116366 (+)
G425777 NA non-coding downstream 16095 12455181 ~ 12455395 (+)
G425778 NA non-coding downstream 16407 12455493 ~ 12455853 (+)
G425796 NA non-coding downstream 121988 12561074 ~ 12561425 (+)
CI01000304_12583384_12588591 WDR74 non-coding downstream 149835 12583384 ~ 12589788 (+)
G425812 NA non-coding downstream 152170 12591256 ~ 12593865 (+)
CI01000304_10555326_10571933 NA other upstream 1873001 10555216 ~ 10572164 (+)
G424251 NA other upstream 2235810 10188822 ~ 10189404 (+)
G424246 NA other upstream 2301383 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2863132 9561005 ~ 9565778 (+)
G423614 NA other upstream 3479283 8949036 ~ 8949422 (+)
CI01000304_13578347_13595075 NA other downstream 1117365 13578049 ~ 13595097 (+)
G426312 NA other downstream 1890962 14330048 ~ 14330886 (+)
G426828 NA other downstream 2509804 14948890 ~ 14950592 (+)
G427860 NA other downstream 3446368 15885454 ~ 15889591 (+)
G428017 NA other downstream 3644144 16083230 ~ 16083714 (+)

Expression


Co-expression Network