G425777


Basic Information

Item Value
gene id G425777
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12455181 ~ 12455395 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488929
TGCTTTTTTCAGGTCTGTCAGTACCTGCAGCTGGGGTGTGAGTATTGCTTCAAACTCCAGACTGAGGAAGTCCGGGTTAGACCGCAGGACTGAGGGCGCCGTCTCCATCAGTTTCTCAATGTCCCGCAGGGCTGCCTGCGCCCCCTCTTTGGACTGAAACTTATCCAGCAGCTGGTTAGCCAGCAGATAGGCCCCCTCATCACACCAACGCACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488929 True 215 lncRNA 0.56 1 12455181 12455395

Neighbor

gene id symbol gene type direction distance location
CI01000304_12437868_12439019 NA coding upstream 16162 12434972 ~ 12439086 (+)
CI01000304_12424217_12429262 NA coding upstream 25773 12423206 ~ 12430351 (+)
CI01000304_12394477_12400175 TMTOPS3B coding upstream 54866 12393500 ~ 12400315 (+)
CI01000304_12385473_12389970 NA coding upstream 64654 12385473 ~ 12390527 (+)
CI01000304_12375591_12385064 HTATSF1 coding upstream 70061 12375591 ~ 12385120 (+)
CI01000304_12468041_12473615 ARR3A coding downstream 12646 12468041 ~ 12473708 (+)
CI01000304_12478136_12484791 NA coding downstream 22741 12478136 ~ 12484978 (+)
CI01000304_12485748_12487703 SSSCA1 coding downstream 30353 12485748 ~ 12487763 (+)
CI01000304_12489630_12490940 FAM89B coding downstream 34187 12489582 ~ 12491500 (+)
CI01000304_12496984_12537562 EHBP1L1B, FRMD8 coding downstream 41484 12496879 ~ 12539153 (+)
G425764 NA non-coding upstream 152455 12302340 ~ 12302726 (+)
G425765 NA non-coding upstream 154559 12300413 ~ 12300622 (+)
G425666 NA non-coding upstream 197987 12255099 ~ 12257194 (+)
G425660 NA non-coding upstream 281122 12172882 ~ 12174059 (+)
G425635 NA non-coding upstream 338815 12111311 ~ 12116366 (+)
G425778 NA non-coding downstream 98 12455493 ~ 12455853 (+)
G425796 NA non-coding downstream 105679 12561074 ~ 12561425 (+)
CI01000304_12583384_12588591 WDR74 non-coding downstream 133526 12583384 ~ 12589788 (+)
G425812 NA non-coding downstream 135861 12591256 ~ 12593865 (+)
G425830 NA non-coding downstream 229262 12684657 ~ 12684926 (+)
G425718 NA other upstream 16095 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 1899477 10555216 ~ 10572164 (+)
G424251 NA other upstream 2262286 10188822 ~ 10189404 (+)
G424246 NA other upstream 2327859 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2889608 9561005 ~ 9565778 (+)
CI01000304_13578347_13595075 NA other downstream 1101056 13578049 ~ 13595097 (+)
G426312 NA other downstream 1874653 14330048 ~ 14330886 (+)
G426828 NA other downstream 2493495 14948890 ~ 14950592 (+)
G427860 NA other downstream 3430059 15885454 ~ 15889591 (+)
G428017 NA other downstream 3627835 16083230 ~ 16083714 (+)

Expression


Co-expression Network