G425778


Basic Information

Item Value
gene id G425778
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12455493 ~ 12455853 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488930
CGCAACAGAAGGTCTCGTATGCGCGTGAGAGATGCCCGCTTGGCACGCAGAGCTGTTGTGAGAGTGTCACAGTGATGCCTCAGTTCATTGCAGCGCTGAACTATTAGGGCAAGAGCGTAGTGATGACTTGCTGCAAGCTGATGCCCATGCAGAATAATAATCTGAGCACGGCCCATTTCCTCCTGCAAGAACAATACAGCGCTCTCAGCTATTAATCAAACACTTGTGTATATCAGTTAAAACACAGGTCAAAAGATGTTTCCCCTTGTCAACTCTCAACATCAGCGTCAATCAACATATGTGGTGTGCAATGTATTTGAACTGAAGGCATCTCAATAAGGCATGTTTCTTTTTATTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488930 True 361 lncRNA 0.45 1 12455493 12455853

Neighbor

gene id symbol gene type direction distance location
CI01000304_12437868_12439019 NA coding upstream 16474 12434972 ~ 12439086 (+)
CI01000304_12424217_12429262 NA coding upstream 26085 12423206 ~ 12430351 (+)
CI01000304_12394477_12400175 TMTOPS3B coding upstream 55178 12393500 ~ 12400315 (+)
CI01000304_12385473_12389970 NA coding upstream 64966 12385473 ~ 12390527 (+)
CI01000304_12375591_12385064 HTATSF1 coding upstream 70373 12375591 ~ 12385120 (+)
CI01000304_12468041_12473615 ARR3A coding downstream 12188 12468041 ~ 12473708 (+)
CI01000304_12478136_12484791 NA coding downstream 22283 12478136 ~ 12484978 (+)
CI01000304_12485748_12487703 SSSCA1 coding downstream 29895 12485748 ~ 12487763 (+)
CI01000304_12489630_12490940 FAM89B coding downstream 33729 12489582 ~ 12491500 (+)
CI01000304_12496984_12537562 EHBP1L1B, FRMD8 coding downstream 41026 12496879 ~ 12539153 (+)
G425777 NA non-coding upstream 98 12455181 ~ 12455395 (+)
G425764 NA non-coding upstream 152767 12302340 ~ 12302726 (+)
G425765 NA non-coding upstream 154871 12300413 ~ 12300622 (+)
G425666 NA non-coding upstream 198299 12255099 ~ 12257194 (+)
G425660 NA non-coding upstream 281434 12172882 ~ 12174059 (+)
G425796 NA non-coding downstream 105221 12561074 ~ 12561425 (+)
CI01000304_12583384_12588591 WDR74 non-coding downstream 133068 12583384 ~ 12589788 (+)
G425812 NA non-coding downstream 135403 12591256 ~ 12593865 (+)
G425830 NA non-coding downstream 228804 12684657 ~ 12684926 (+)
G425816 NA non-coding downstream 230275 12686128 ~ 12688600 (+)
G425718 NA other upstream 16407 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 1899789 10555216 ~ 10572164 (+)
G424251 NA other upstream 2262598 10188822 ~ 10189404 (+)
G424246 NA other upstream 2328171 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 2889920 9561005 ~ 9565778 (+)
CI01000304_13578347_13595075 NA other downstream 1100598 13578049 ~ 13595097 (+)
G426312 NA other downstream 1874195 14330048 ~ 14330886 (+)
G426828 NA other downstream 2493037 14948890 ~ 14950592 (+)
G427860 NA other downstream 3429601 15885454 ~ 15889591 (+)
G428017 NA other downstream 3627377 16083230 ~ 16083714 (+)

Expression


Co-expression Network