G425831


Basic Information

Item Value
gene id G425831
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12689434 ~ 12689765 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU488993
GTTTCATTATAGAATGTTGACTTTTTACAATAAACCAGCTTTTAACTAACTGAATCCTAAGTTCACAAATGAAGAGATATATCAACACGTTTCAGTCACCCATAGGCCAGGGGTGTCTAATCCTGTAGAGTTTAGCTCCGATCCTAATTAAACACACCTGAACCAGCTAATCAAGGTCTTCAGGATTACTAGAAACTTCCAGGCAAATGTTGAGGCATGTTGTAGCTAAACTGCAGGACTTTGGTCCTTCAGGAGAAGGACTGGACACCCCTGCCTTAGATTACACACATTTCAGTCAAGTAGAAATATACACATTTCAGTCAGTAATTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU488993 True 332 lncRNA 0.39 1 12689434 12689765

Neighbor

gene id symbol gene type direction distance location
CI01000304_12653236_12670625 CXADR coding upstream 18451 12652837 ~ 12670983 (+)
CI01000304_12601154_12621980 EHD1B, EHD1 coding upstream 67441 12600836 ~ 12621993 (+)
CI01000304_12583384_12588591 WDR74 coding upstream 100370 12583384 ~ 12589788 (+)
CI01000304_12569155_12569469 NA coding upstream 119700 12569155 ~ 12569734 (+)
CI01000304_12556446_12557806 FAUB, UBIM, FAU coding upstream 131358 12556446 ~ 12558076 (+)
CI01000304_12718988_12729338 NA coding downstream 29002 12718767 ~ 12729850 (+)
CI01000304_12744525_12773999 NA coding downstream 54294 12744059 ~ 12774312 (+)
CI01000304_12819247_12825161 NA coding downstream 128214 12817979 ~ 12825313 (+)
CI01000304_12828251_12839287 NA coding downstream 137549 12827314 ~ 12839991 (+)
CI01000304_13331382_13338351 RNFT1 coding downstream 641617 13331382 ~ 13339248 (+)
G425817 NA non-coding upstream 358 12688849 ~ 12689076 (+)
G425816 NA non-coding upstream 834 12686128 ~ 12688600 (+)
G425830 NA non-coding upstream 4508 12684657 ~ 12684926 (+)
G425812 NA non-coding upstream 95569 12591256 ~ 12593865 (+)
G425832 NA non-coding downstream 664 12690429 ~ 12691062 (+)
G425835 NA non-coding downstream 3319 12693084 ~ 12694418 (+)
G425834 NA non-coding downstream 4853 12694618 ~ 12694890 (+)
G425930 NA non-coding downstream 199566 12889331 ~ 13036691 (+)
G426266 NA non-coding downstream 389907 13079672 ~ 13079904 (+)
G425718 NA other upstream 250348 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 2133730 10555216 ~ 10572164 (+)
G424251 NA other upstream 2496539 10188822 ~ 10189404 (+)
G424246 NA other upstream 2562112 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 3123861 9561005 ~ 9565778 (+)
CI01000304_13578347_13595075 NA other downstream 866686 13578049 ~ 13595097 (+)
G426312 NA other downstream 1640283 14330048 ~ 14330886 (+)
G426828 NA other downstream 2259125 14948890 ~ 14950592 (+)
G427860 NA other downstream 3195689 15885454 ~ 15889591 (+)
G428017 NA other downstream 3393465 16083230 ~ 16083714 (+)

Expression


Co-expression Network