Gene
RNA
| Item | Value |
|---|---|
| gene id | G425835 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 12693084 ~ 12694418 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU488998 | False | 1335 | lncRNA | 0.43 | 1 | 12693084 | 12694418 |
| TU488997 | True | 231 | lncRNA | 0.59 | 1 | 12694188 | 12694418 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_12653236_12670625 | CXADR | coding | upstream | 22101 | 12652837 ~ 12670983 (+) |
| CI01000304_12601154_12621980 | EHD1B, EHD1 | coding | upstream | 71091 | 12600836 ~ 12621993 (+) |
| CI01000304_12583384_12588591 | WDR74 | coding | upstream | 104020 | 12583384 ~ 12589788 (+) |
| CI01000304_12569155_12569469 | NA | coding | upstream | 123350 | 12569155 ~ 12569734 (+) |
| CI01000304_12556446_12557806 | FAUB, UBIM, FAU | coding | upstream | 135008 | 12556446 ~ 12558076 (+) |
| CI01000304_12718988_12729338 | NA | coding | downstream | 24349 | 12718767 ~ 12729850 (+) |
| CI01000304_12744525_12773999 | NA | coding | downstream | 49641 | 12744059 ~ 12774312 (+) |
| CI01000304_12819247_12825161 | NA | coding | downstream | 123561 | 12817979 ~ 12825313 (+) |
| CI01000304_12828251_12839287 | NA | coding | downstream | 132896 | 12827314 ~ 12839991 (+) |
| CI01000304_13331382_13338351 | RNFT1 | coding | downstream | 636964 | 13331382 ~ 13339248 (+) |
| G425832 | NA | non-coding | upstream | 2022 | 12690429 ~ 12691062 (+) |
| G425831 | NA | non-coding | upstream | 3319 | 12689434 ~ 12689765 (+) |
| G425817 | NA | non-coding | upstream | 4008 | 12688849 ~ 12689076 (+) |
| G425816 | NA | non-coding | upstream | 4484 | 12686128 ~ 12688600 (+) |
| G425830 | NA | non-coding | upstream | 8158 | 12684657 ~ 12684926 (+) |
| G425834 | NA | non-coding | downstream | 200 | 12694618 ~ 12694890 (+) |
| G425930 | NA | non-coding | downstream | 194913 | 12889331 ~ 13036691 (+) |
| G426266 | NA | non-coding | downstream | 385254 | 13079672 ~ 13079904 (+) |
| G426274 | NA | non-coding | downstream | 424491 | 13118909 ~ 13119304 (+) |
| G426278 | NA | non-coding | downstream | 429039 | 13123457 ~ 13123685 (+) |
| G425718 | NA | other | upstream | 253998 | 12436554 ~ 12436605 (+) |
| CI01000304_10555326_10571933 | NA | other | upstream | 2137380 | 10555216 ~ 10572164 (+) |
| G424251 | NA | other | upstream | 2500189 | 10188822 ~ 10189404 (+) |
| G424246 | NA | other | upstream | 2565762 | 10116343 ~ 10127322 (+) |
| CI01000304_09564068_09565679 | HRH2B | other | upstream | 3127511 | 9561005 ~ 9565778 (+) |
| CI01000304_13578347_13595075 | NA | other | downstream | 862033 | 13578049 ~ 13595097 (+) |
| G426312 | NA | other | downstream | 1635630 | 14330048 ~ 14330886 (+) |
| G426828 | NA | other | downstream | 2254472 | 14948890 ~ 14950592 (+) |
| G427860 | NA | other | downstream | 3191036 | 15885454 ~ 15889591 (+) |
| G428017 | NA | other | downstream | 3388812 | 16083230 ~ 16083714 (+) |
