G426147


Basic Information

Item Value
gene id G426147
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12719497 ~ 12805926 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489349
AGCGACGGGACACGAGCTTGAAACCAGCGACTGTTTCGAGGAAAGGAAGCGGAGTTCGGGGTTTTTAGTGCGGTTTTACTCCACCCAATCTGTCTGTAGGAGGAAAATACTGTACGCTTTGTTGGATTTTCTAGCTCGGCACGAGCGCACGGGAGAGAGGCGCGCGGATGGTTTGTCACTGAGCGCGCCCCTGACACAAAAGCATATAACATAAGCGGCAGCTTCCGTTAAGCGACGGTTGGCGAGGATTTCAAACGGCCAATTCGCGCGAAGGGGGCGAACTGAGGGATTTCTCCACTTCTCTGCGTTCTTGGGTACCAGACACATGGCTGCCTTTGTCCGAGAGCCTCTCTCGCTTTGAGCTCTGGATGTTTTTCTTCTTCCCTGGGAAAAGGCTTCTTATTTTGCATGGCTGTCATTCTCTCAAAGGGAGCGAGAGGAATTCGCCGCCTGTTTATGGATTACATTGTTTGACAAGCAGAATGTGAAACAGCGCATTTTCTAAACCTGCTAAAAGTGATTTCTTGACTTATTTTCCTCCGTGCCAACCTCGCCACATCAAAAGGGCTCAGATGCCAGCTCAGAGAAACTCTTCAGCACAGCTGCAGTTAAAGTTTCAGATTTTAGCGTTGACACGCTCTCCACCAATGCCAGCCAGGAGCTGCGTGGCCTGGGCATTCCCAAGGTGTCAGGCCTAGAGCGCAGTCAAGAGAAGAGCCAGGAGACTTCCCGTGAACTCTCCTCGGCCACCCCCTCACTGGTGCCCACTTCCCATTCCAAACCTCCCCTCCCCGCCCCTCTTCACCTCCAGCCACCCCCCTCCAACCGGGGGTTACCCTTGGCCCCAAGTCCA
>TU489350
GTCCCCGCTCGCTCTGGGATCCTGAAGCACGGACTCGCGGAGAAGAGAAGCGTCGCTTCCTTGCAGGATTTATTTGTTTGTGGAAAAATTTCTCTTTTGTTTTCCGTTCTAGAGCAGCACGCTTTCCGAATGTCGATGACTCGCTCGGACGGCCCTTCTCCACTCGCCAGGCTTTGCATGTGTTGCTTTTGTCCTGCAGGAGAAAAGGCAGGCTTTGTGTTTTGGTGGATCTAGAGCTGAAGGAGGCATCGCCAGGCGCTGCTGCTGCTGCTGTGGGCTGGACCGGCCACGGATGGGAAGGTGTCAGACTGCACTTAAACAGAGTGTTGGGTCCGTGAGGACAGCCATGTGGGAGACCTGTTACAGCTCCGTTGGAAGACACTTCAAGTGATCTGCCAGTTTGTTTCCCTTAAACGTGGGCTGAATTTGGAAGTTTGGATACTTTCCAGTTTGGCAAACCTTAACTGGATTCTATTTTGGATTTCTGTGCTTGTGGATATATGCATTTATCCTTCTGGAATCTCATGTGCGTATTGCATTTCAAACAAAGTCACATAACATCAGCCGGTTGTGGAATTTGGATAATAGCACATCTCTCAGTGGAGTTGAGTTATTAAGCTTTCAATTACAGGTGTTTGTTGGGAATCGTGCGAGTTCTGCATCCACATCTGAGCTTGAGCCGAGAACCTCCTTCTAGGAAGTGTTTGGTTGAGTGTGTCATCTGGTGAAATGGATGGCCCGCGGTGCAGCGGGATCCGGAAAAAGCGTAAGTCTCGGTCGGTGCGAAACCGGGAGCGCATGTCTAACGGGATCAGGAATAACCATGTCCGGGGCTCCGTGCTTCGATTCTCCTCGGATTCTGAGAGGGAAGACAGCACCAACCCCTCCTCCTCCTCACGACCCAGACCACCGAGGAGGAAGAGGAAGGAGTCTACCTCTGCTGAGGAGGACATCATTGACGGATTCTCAATATCGGGATTTATGACGTTGGAAGCTCTTGAGAAGGACGTGACCCTGAAGCCCCATGAGCGGAGGCAGAACCAGGCAGGACCGCTGCGCAAGAAGAAGCCCGGCCGAGTGCCGAACGGACTGAGCTTGGACCTACACAAGGACCGACTCAACCACAACAACCACCAGCACCACCACTCAGACCAGGAGAACAACCCTCGGCTGGCCCATACACACAGCAAGAAGAAGAAACACCTGCAGAAGAAACACCGACCTTTAAAGCCAGGCCAGAACAACTGCAAAGACAGTGACAGTGAGAGCGTCAGTGGAGAATCCAAACCCTCCATCCGGAGCAGCTCCAGAGACAGACTGACAGACTGTGACAGCGAGAGTGACCAAGAAGACAAGGGCTCAGATGCCAGCTCAGAGAAACTCTTCAGCACAGCTGCAGTTAAAGTTTCAGATTTTAGCGTTGACACGCTCTCCACCAATGCCAGCCAGGAGCTGCGTGGCCTGGGCATTCCCAAGGTGTCAGGCCTAGAGCGCAGTCAAGAGAAGAGCCAGGAGACTTCCCGTGAACTCTCCTCGGCCACCCCCTCACTGGTGCCCACTTCCCATTCCAAACCTCCCCTCCCCGCCCCTCTTCACCTCCAGCCACCCCCCTCCAACCGGGGGTTACCCTTGGCCCCAAGTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489349 False 614 lncRNA 0.54 2 12719497 12721126
TU489350 True 79 TUCP 0.53 2 12719497 12805926

Neighbor

gene id symbol gene type direction distance location
CI01000304_12570121_12574061 CNIH2 coding downstream 121937 12570059 ~ 12574061 (-)
CI01000304_12559311_12559998 NA coding downstream 136000 12558854 ~ 12560135 (-)
CI01000304_12558231_12558565 NA coding downstream 137408 12558086 ~ 12558741 (-)
CI01000304_12555015_12556002 MRPL49 coding downstream 139996 12554726 ~ 12556002 (-)
CI01000304_12552338_12553936 NA coding downstream 142062 12552280 ~ 12553936 (-)
CI01000304_12887576_12889393 NA coding upstream 166098 12887224 ~ 12889393 (-)
CI01000304_12953008_12953457 NA coding upstream 231578 12952704 ~ 12953480 (-)
CI01000304_13036242_13039203 NA coding upstream 313559 13034685 ~ 13039315 (-)
CI01000304_13068737_13075920 NA coding upstream 347376 13068502 ~ 13075920 (-)
CI01000304_13185020_13207799 INTS2 coding upstream 463092 13184218 ~ 13207799 (-)
G426135 NA non-coding downstream 70620 12621467 ~ 12625378 (-)
G426188 NA non-coding downstream 105886 12589913 ~ 12590112 (-)
G426184 NA non-coding downstream 106778 12588923 ~ 12589220 (-)
G426142 NA non-coding downstream 160794 12534071 ~ 12535204 (-)
G427020 NA non-coding upstream 374297 13095423 ~ 13095773 (-)
G427023 NA non-coding upstream 380319 13101445 ~ 13101719 (-)
G427025 NA non-coding upstream 383452 13104578 ~ 13104792 (-)
G427042 NA non-coding upstream 419707 13140833 ~ 13141045 (-)
CI01000304_13367200_13384209 NA non-coding upstream 571129 13365346 ~ 13395129 (-)
G426106 NA other downstream 355770 12336701 ~ 12340228 (-)
G425580 NA other downstream 823092 11868677 ~ 11872906 (-)
CI01000304_11338304_11348212 ILK other downstream 1338852 11338019 ~ 11348212 (-)
G424808 NA other downstream 2153333 10444355 ~ 10542665 (-)
G427057 NA other upstream 786515 13507641 ~ 13507922 (-)
G427154 NA other upstream 1210665 13931791 ~ 13950548 (-)
G427309 NA other upstream 1468342 14181932 ~ 14237078 (-)
CI01000304_14265881_14269102 NA other upstream 1547297 14265476 ~ 14269571 (-)
CI01000304_14286960_14294449 NA other upstream 1562545 14286960 ~ 14294449 (-)
CI01000304_13210441_13259571 MED13, MED13A coding upstream 170413 13209728 ~ 13262698 (-)
CI01000304_13276793_13278145 NA coding upstream 236932 13276247 ~ 13278145 (-)
CI01000304_13342458_13361412 RPS6KB1A coding upstream 303105 13342420 ~ 13361412 (-)

Expression


Co-expression Network