G425930


Basic Information

Item Value
gene id G425930
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 12889331 ~ 13036691 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489094
TTTGGATTCTCCACTGACGCTCTCACTGTCACTGTCTTTGCAGTTGTTCTGGCCTGGCTTTAAAGGTCGGTGTTTCTTCTGCAGGTGTTTCTTCTTCTTGCTGTGTGTATGGGCCAGCCGAGGGTTGTTCTCCTGGTCTGAGTGGTGGTGCTGGTGGTTGTTGTGGTTGAGTCGGTCCTTGTGTAGGTCCAAGCTCAGTCCGTTCGGCACTCGGCCGGGCTTCTTCTTGCGCAGCGGTCCTGCCTGGTTCTGCCTCCGCTCATGGGGCTTCAGGGTCACGTCCTTCTCAAGAGCTTCCAACGTCATAAATCCCGATATTGAGAATCCGTCAATGATGTCCTCCTCAGCAGAGGTAGACTCCTTCCTCTTCCTCCTCGGTGGTCTGGGTCGTGAGGAGGAGGAGGGGTTGGTGCTGTCTTCCCTCTCAGAATCCGAGGAGAATCGAAGCACGGAGCCCCGGACATGGTTATTCCTGATCCCGTTAGACATGCGCTCCCGGTTTCGCACCGACCGAGACTTACGCTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489094 True 528 lncRNA 0.55 3 12889331 13036691

Neighbor

gene id symbol gene type direction distance location
CI01000304_12828251_12839287 NA coding upstream 49340 12827314 ~ 12839991 (+)
CI01000304_12819247_12825161 NA coding upstream 64018 12817979 ~ 12825313 (+)
CI01000304_12744525_12773999 NA coding upstream 115019 12744059 ~ 12774312 (+)
CI01000304_12718988_12729338 NA coding upstream 159481 12718767 ~ 12729850 (+)
CI01000304_12653236_12670625 CXADR coding upstream 218348 12652837 ~ 12670983 (+)
CI01000304_13331382_13338351 RNFT1 coding downstream 294691 13331382 ~ 13339248 (+)
CI01000304_13435609_13438459 PTRH2 coding downstream 398816 13435507 ~ 13438730 (+)
CI01000304_13578347_13595075 NA coding downstream 541358 13578049 ~ 13595097 (+)
CI01000304_13613026_13686604 CBLB coding downstream 576335 13613026 ~ 13686604 (+)
CI01000304_13731299_13731640 NA coding downstream 694551 13731242 ~ 13731650 (+)
G425834 NA non-coding upstream 194441 12694618 ~ 12694890 (+)
G425835 NA non-coding upstream 194913 12693084 ~ 12694418 (+)
G425832 NA non-coding upstream 198269 12690429 ~ 12691062 (+)
G425831 NA non-coding upstream 199566 12689434 ~ 12689765 (+)
G425817 NA non-coding upstream 200255 12688849 ~ 12689076 (+)
G426266 NA non-coding downstream 42981 13079672 ~ 13079904 (+)
G426274 NA non-coding downstream 82218 13118909 ~ 13119304 (+)
G426278 NA non-coding downstream 86766 13123457 ~ 13123685 (+)
G426288 NA non-coding downstream 97457 13134148 ~ 13134657 (+)
G426289 NA non-coding downstream 99389 13136080 ~ 13136323 (+)
G425718 NA other upstream 450245 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 2333627 10555216 ~ 10572164 (+)
G424251 NA other upstream 2696436 10188822 ~ 10189404 (+)
G424246 NA other upstream 2762009 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 3323758 9561005 ~ 9565778 (+)
G426312 NA other downstream 1293357 14330048 ~ 14330886 (+)
G426828 NA other downstream 1912199 14948890 ~ 14950592 (+)
G427860 NA other downstream 2848763 15885454 ~ 15889591 (+)
G428017 NA other downstream 3046539 16083230 ~ 16083714 (+)

Expression


Co-expression Network