G426300


Basic Information

Item Value
gene id G426300
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13160733 ~ 13160945 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489525
AAAAGTTTTATTTTTAAGAGACCAAATCCTGTAATACACCACAGATATTGAGAGGGACACATCAGATGCAGATTCTTGGCACATTATGCTTTTTCCAATAGCGCATTCTTAAATCATAACATCAACAACCAGTCCTTAATGTTTACATCGTTTACAGCAAATAACTATACAATATGGCCACCAACCTGTATGACAGGAGTCTGCGACAGTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489525 True 213 lncRNA 0.37 1 13160733 13160945

Neighbor

gene id symbol gene type direction distance location
CI01000304_12828251_12839287 NA coding upstream 320742 12827314 ~ 12839991 (+)
CI01000304_12819247_12825161 NA coding upstream 335420 12817979 ~ 12825313 (+)
CI01000304_12744525_12773999 NA coding upstream 386421 12744059 ~ 12774312 (+)
CI01000304_12718988_12729338 NA coding upstream 430883 12718767 ~ 12729850 (+)
CI01000304_12653236_12670625 CXADR coding upstream 489750 12652837 ~ 12670983 (+)
CI01000304_13331382_13338351 RNFT1 coding downstream 170437 13331382 ~ 13339248 (+)
CI01000304_13435609_13438459 PTRH2 coding downstream 274562 13435507 ~ 13438730 (+)
CI01000304_13578347_13595075 NA coding downstream 417104 13578049 ~ 13595097 (+)
CI01000304_13613026_13686604 CBLB coding downstream 452081 13613026 ~ 13686604 (+)
CI01000304_13731299_13731640 NA coding downstream 570297 13731242 ~ 13731650 (+)
G426290 NA non-coding upstream 22987 13137539 ~ 13137746 (+)
G426289 NA non-coding upstream 24410 13136080 ~ 13136323 (+)
G426288 NA non-coding upstream 26076 13134148 ~ 13134657 (+)
G426278 NA non-coding upstream 37048 13123457 ~ 13123685 (+)
G426274 NA non-coding upstream 41429 13118909 ~ 13119304 (+)
G426392 NA non-coding downstream 7076 13168021 ~ 13168267 (+)
G426393 NA non-coding downstream 9245 13170190 ~ 13170485 (+)
G426397 NA non-coding downstream 15461 13176406 ~ 13176636 (+)
G426399 NA non-coding downstream 19429 13180374 ~ 13180586 (+)
G426400 NA non-coding downstream 20688 13181633 ~ 13181861 (+)
G425718 NA other upstream 721647 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 2605029 10555216 ~ 10572164 (+)
G424251 NA other upstream 2967838 10188822 ~ 10189404 (+)
G424246 NA other upstream 3033411 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 3595160 9561005 ~ 9565778 (+)
G426312 NA other downstream 1169103 14330048 ~ 14330886 (+)
G426828 NA other downstream 1787945 14948890 ~ 14950592 (+)
G427860 NA other downstream 2724509 15885454 ~ 15889591 (+)
G428017 NA other downstream 2922285 16083230 ~ 16083714 (+)

Expression


Co-expression Network