G426392


Basic Information

Item Value
gene id G426392
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13168021 ~ 13168267 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489618
GCGGAAGCTAGATATTTTATTTCATAACTTGTTAAATATGGATCTTTTTTTTTTTTTTTTTTTTTTTTACACAAACACATCGCTTCGCTTCAGAAGGCCTTTATTAACCCCCCGGAGCCATGTGGAGTATGTTTATGATAGATGGATGTGGATGGAAGCACTTTCTTCAGCTCATACTCGTTGGTATCGCTCACTACCATTATAAAGCTTGGATGCTTCAGGATATTTATTAATATATCTCCGATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489618 True 247 lncRNA 0.36 1 13168021 13168267

Neighbor

gene id symbol gene type direction distance location
CI01000304_12828251_12839287 NA coding upstream 328030 12827314 ~ 12839991 (+)
CI01000304_12819247_12825161 NA coding upstream 342708 12817979 ~ 12825313 (+)
CI01000304_12744525_12773999 NA coding upstream 393709 12744059 ~ 12774312 (+)
CI01000304_12718988_12729338 NA coding upstream 438171 12718767 ~ 12729850 (+)
CI01000304_12653236_12670625 CXADR coding upstream 497038 12652837 ~ 12670983 (+)
CI01000304_13331382_13338351 RNFT1 coding downstream 163115 13331382 ~ 13339248 (+)
CI01000304_13435609_13438459 PTRH2 coding downstream 267240 13435507 ~ 13438730 (+)
CI01000304_13578347_13595075 NA coding downstream 409782 13578049 ~ 13595097 (+)
CI01000304_13613026_13686604 CBLB coding downstream 444759 13613026 ~ 13686604 (+)
CI01000304_13731299_13731640 NA coding downstream 562975 13731242 ~ 13731650 (+)
G426300 NA non-coding upstream 7076 13160733 ~ 13160945 (+)
G426290 NA non-coding upstream 30275 13137539 ~ 13137746 (+)
G426289 NA non-coding upstream 31698 13136080 ~ 13136323 (+)
G426288 NA non-coding upstream 33364 13134148 ~ 13134657 (+)
G426278 NA non-coding upstream 44336 13123457 ~ 13123685 (+)
G426393 NA non-coding downstream 1923 13170190 ~ 13170485 (+)
G426397 NA non-coding downstream 8139 13176406 ~ 13176636 (+)
G426399 NA non-coding downstream 12107 13180374 ~ 13180586 (+)
G426400 NA non-coding downstream 13366 13181633 ~ 13181861 (+)
G426354 NA non-coding downstream 42428 13210695 ~ 13214753 (+)
G425718 NA other upstream 728935 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 2612317 10555216 ~ 10572164 (+)
G424251 NA other upstream 2975126 10188822 ~ 10189404 (+)
G424246 NA other upstream 3040699 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 3602448 9561005 ~ 9565778 (+)
G426312 NA other downstream 1161781 14330048 ~ 14330886 (+)
G426828 NA other downstream 1780623 14948890 ~ 14950592 (+)
G427860 NA other downstream 2717187 15885454 ~ 15889591 (+)
G428017 NA other downstream 2914963 16083230 ~ 16083714 (+)

Expression


Co-expression Network