G426995


Basic Information

Item Value
gene id G426995
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13379166 ~ 13379942 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490266
NNNNATTTCAAATGTCAATCCACTGAAACACGGCATGTCGTAATCTGTGACGAAGGTGAGAACCAATGAGCGTTTGATATCAGTGCCGTAAACCATGTCGTAACGCTTCTCGAGGGTGGCGCTACTTTCAAATTTGAATCATAACGAGCGCGAGCTTTGACTGTGACGGTCGCTGTTGCTGAAAATCAAAATGAAGATCGATGGATAAAGGGCTGAATTTGGATCTGTTCCTTACAAACATATGGATTCTAAAGATTGGGAGTACAGCGAACAAATAAAATTGATGTGATTTGTGAATTTATGTTGTGTTTTGGTGTATCTTATGGTTGTATTGTCAGTCACTGCATAGGAGAAAACGCCTTCTGTGTCGCACAGCAAACAAACTAAATGTTACAAAATGGTTAAACAATTACAGAAAATGTATTCATAAGGTTTTAAATTGTAGTCTTGTTTAACATTATGCAATCCTCCGAAACGAGCAGCACAAGTCACAAACAGAAATGTTATTTAAGTAGATGAGTAAACTGCTTTCAATAAATTCGTCTAAAAACAACATTAAATCATTAAAGCCACGATTTAATATTAATACATGGGAATTCATATATATTCACACTTTACGTTACATGATTTACGTTTTTATTGCTGTTAATACGTAAGTATTTTTACGTTTTAGTCCTCTAAATACGTCAATGTTGTACGTTTTTGTGTGTATGAAAACGTAAGTAAATGTACGTGTGGTAGAACCACAATTTACGTAAAAATACACAAGTATTCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490266 True 777 lncRNA 0.34 1 13379166 13379942

Neighbor

gene id symbol gene type direction distance location
CI01000304_13342458_13361412 RPS6KB1A coding downstream 17754 13342420 ~ 13361412 (-)
CI01000304_13276793_13278145 NA coding downstream 101021 13276247 ~ 13278145 (-)
CI01000304_13210441_13259571 MED13, MED13A coding downstream 116468 13209728 ~ 13262698 (-)
CI01000304_13185020_13207799 INTS2 coding downstream 171367 13184218 ~ 13207799 (-)
CI01000304_13068737_13075920 NA coding downstream 303246 13068502 ~ 13075920 (-)
CI01000304_13406343_13432947 NA coding upstream 25351 13403026 ~ 13433611 (-)
CI01000304_13444023_13466208 CLTCB, CLTCA, CLTC coding upstream 64081 13444023 ~ 13466208 (-)
CI01000304_13479162_13481853 BTG3 coding upstream 98799 13478741 ~ 13482294 (-)
CI01000304_13517595_13527868 NA coding upstream 137234 13517176 ~ 13527868 (-)
CI01000304_13529418_13530787 NA coding upstream 149188 13529130 ~ 13530787 (-)
G427009 NA non-coding downstream 5507 13373086 ~ 13373659 (-)
G426990 NA non-coding downstream 14483 13333337 ~ 13364683 (-)
G427042 NA non-coding downstream 238121 13140833 ~ 13141045 (-)
G427025 NA non-coding downstream 274374 13104578 ~ 13104792 (-)
G427023 NA non-coding downstream 277447 13101445 ~ 13101719 (-)
G426991 NA non-coding upstream 18438 13398380 ~ 13399670 (-)
G427049 NA non-coding upstream 105814 13485756 ~ 13486085 (-)
G427050 NA non-coding upstream 119090 13499032 ~ 13499264 (-)
G427052 NA non-coding upstream 122208 13502150 ~ 13502415 (-)
G426147 NA other downstream 339851 12719497 ~ 12805926 (-)
CI01000304_12559311_12559998 NA other downstream 819031 12558854 ~ 12560135 (-)
G426106 NA other downstream 1038938 12336701 ~ 12340228 (-)
G425580 NA other downstream 1506260 11868677 ~ 11872906 (-)
CI01000304_11338304_11348212 ILK other downstream 2022020 11338019 ~ 11348212 (-)
G427057 NA other upstream 127699 13507641 ~ 13507922 (-)
G427154 NA other upstream 551849 13931791 ~ 13950548 (-)
G427309 NA other upstream 809526 14181932 ~ 14237078 (-)
CI01000304_14265881_14269102 NA other upstream 888481 14265476 ~ 14269571 (-)
CI01000304_14286960_14294449 NA other upstream 903729 14286960 ~ 14294449 (-)

Expression


Co-expression Network