G426494


Basic Information

Item Value
gene id G426494
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13485732 ~ 13485957 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489723
GTCAAATGCGATAACTCCGCAACCATGGCACGTTCTGCAAAAGTGTAATCTATAATATCATTAAATAAATAGCATTATTGATAAATTATCAGTAGCCATATGAGACGGGATATAGTCGTTTATTCATTTGTATTTTTGTGTATGAACAAGCAGAAACACAGAGTGGTGATCCATGGATTTCAAACAGATAGAGGAATGATAAGACAGCACACACCTACATATCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489723 True 226 lncRNA 0.35 1 13485732 13485957

Neighbor

gene id symbol gene type direction distance location
CI01000304_13435609_13438459 PTRH2 coding upstream 47002 13435507 ~ 13438730 (+)
CI01000304_13331382_13338351 RNFT1 coding upstream 146484 13331382 ~ 13339248 (+)
CI01000304_12828251_12839287 NA coding upstream 645741 12827314 ~ 12839991 (+)
CI01000304_12819247_12825161 NA coding upstream 660419 12817979 ~ 12825313 (+)
CI01000304_12744525_12773999 NA coding upstream 711420 12744059 ~ 12774312 (+)
CI01000304_13578347_13595075 NA coding downstream 92092 13578049 ~ 13595097 (+)
CI01000304_13613026_13686604 CBLB coding downstream 127069 13613026 ~ 13686604 (+)
CI01000304_13731299_13731640 NA coding downstream 245285 13731242 ~ 13731650 (+)
CI01000304_13744571_13748279 NA coding downstream 257718 13743675 ~ 13748318 (+)
CI01000304_13932457_13932762 NA coding downstream 445992 13931949 ~ 13933084 (+)
G426493 NA non-coding upstream 154 13485377 ~ 13485578 (+)
G426492 NA non-coding upstream 729 13484632 ~ 13485003 (+)
G426382 NA non-coding upstream 30381 13453334 ~ 13455351 (+)
G426324 NA non-coding upstream 41285 13443277 ~ 13444447 (+)
G426476 NA non-coding upstream 55098 13430416 ~ 13430634 (+)
G426495 NA non-coding downstream 22 13485979 ~ 13486216 (+)
G426497 NA non-coding downstream 18835 13504792 ~ 13505142 (+)
G426498 NA non-coding downstream 28949 13514906 ~ 13515832 (+)
G426360 NA non-coding downstream 33467 13519424 ~ 13533081 (+)
G426369 NA non-coding downstream 33928 13519885 ~ 13525938 (+)
G425718 NA other upstream 1046646 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 2930028 10555216 ~ 10572164 (+)
G424251 NA other upstream 3292837 10188822 ~ 10189404 (+)
G424246 NA other upstream 3358410 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 3920159 9561005 ~ 9565778 (+)
G426312 NA other downstream 844091 14330048 ~ 14330886 (+)
G426828 NA other downstream 1462933 14948890 ~ 14950592 (+)
G427860 NA other downstream 2399497 15885454 ~ 15889591 (+)
G428017 NA other downstream 2597273 16083230 ~ 16083714 (+)

Expression


Co-expression Network