G427000


Basic Information

Item Value
gene id G427000
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13510079 ~ 13513826 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490271
AATATACAAGTTTCACTTTTTGAATGGAATTAGTGAAATAAATCAACTTTTTGATGATATTCTAATTATATGACCAGCACCTGTATATATATATAATATTTTTTCTGCTTTTTTTTGTTGACACTGAATGCTTTCTATACGAGAATGTCAGTGTTGTCTAGCTGAATGCATAGTAGCTATGTATAGATTTAGGAAAATTAGTGTGTACTCACACTAGGCACAGTTGCCTTGAACGGAGCCCGAGTGCGATTGCACCTCTTGCAAGCGGGCCGGGGACTGCTAAACGAACCGCGCCCGGGCACGGAACGGAGCGATCACACTTGTCAAAGGACCCGGGCTTTGGGGGTCAAACGCGCTCGGGCATGGTTCAGAGGGCCTAGTGTGAGTACACAAGGTACTCACACTAGCCACGGTTGCCTTGAACCGAGCCCGAGCGCGATTGTCCCCCCACTCCCCCGGTGGCCTGCACTCACACTGCACTTAACGTTCCAGGCCGAAGCACGCTTACGTCATATACGATGCAACTTTTTGAATGGAAGAAATGCACAGATACTGCCTGATATATTTATCATTTATGCCGCGCATTGATTTTCACTTGCACGTATCAGAGGATTATTACAGCGGCTGACGTTAATGGAGGAATTTGCAGCTTTACTCGCAAACTACAATTCCTGTTCATTAATAAACTGAGAATCAGACCCGTTATAAACCCAAATACACTCAAATTAATTACATGAATTGATAAGTATATCAGAGTAGTAATAAAGATGTTTGCCGTCGTAATGATGACAGTAGCGCACACAAAAGTAGTAACTGTTCCGTGCTCTGGCACGGTTAGCGCTCACACTGCATGCGAACCGCGCTCGAGCCCAACCGAACCACGCTCTGGCCCACCTGTTCCAAGCGGGCCAGGGCCGGCTAAACGAACCGCACTCACACTTGTCAAACGAACCGGGCTTTGAGGGTCAAACGCGCTCGGGCACGGTTCAGAGCGCCTAGTGTGAGTACAACCTAGTCAATACTGTTGTACACAAAAGAAAATGAACATTTGTATTTATACATTTAAAGTACATTTATTTGTACAGTACTGCTGTAGCTGCTGCAGTTTAGGGTTGTGATATGTTCCTCCATGTTCAAAAATGCTCTGTAAAAAAAAAAAAAAAATCAGTAAAAAAACGGATGATGTACTGGCAGAAAATTTCCAGGACATTATCCAGTAATTTTACAGACATTTCCGTTAACCCTAAAACACAACACAATGAAGATCAAAATTCAAAATACAGGTAAAACACCTGTAAAAAAAAAAAAAAATACGGAAAATTCTGTCAAATTAATACAGTAGCCAACATTGTGCTATATTTTTTACAGATTTTTTTAAGAGTGTGGTAGTGATTATGGCCAAACTCCATATATGATTCTAAACTTGATTAGTAAGATTGTGATTCCTATTTCATTACTGGAAGGCCATTTTCCAATTCAACAGACATTACAAACATTCCATGTCACAGGTATTTATGGAATATACATGCATGACTGACAGATTTTGATAACTGAATGGATCATTTTGCATGTGATGGCTCACACGATGAAAGAATGTTTAGAAGTTGTGAAGAATTTACAATTTCACTGAGAATCAACTCATCAGTTTTTCAACAAGCCATGTGCATTTAGTTATTGTGCAAATTCTAGACAATTGTACTTACTCTTTCGCACACATGTCAAAACACATGCGATTTGCTTAAATCAATAAGAAACTCAAATCTGATGTGAACAAGAAACTAATTGTTCAGAAATCAGAGATTTGAGAGAAAAAAAATCTGAGAATTGAGAAAAAGCATTTGAGGAAAAACTGTAATTTCCTTTGTAAAATGTGTAATGCACACACTATATAGAATATGACAGGATTCAGATGATGTGCTGCTGTTGACTGCTGGCTGCAGTCACATGCAACGCTTTCTGGAATGCTTTTGGCAATGCGGCAGTAAATCACACTACAACTTTATTTGTCAATCATGGACAGTCTGCCAAAATTCGCTACAACTACAGACGAGCAAATGATACAGAAATCATGACAGTGAATCTTCAAACAATAAATGGTACACTGTGTTACATGCACATGCGTTCATGGGAAAAAACTAGCTGTAATGATCACATCAGATTCATATGGATTAATAAGACTATGGAAATATCATTCGAGCTATTAAATTTGCAAATTCAGGATACCGGCACATACACCTGTACTGTGAAGAGGATTGCAAAACCACCTGAAGAGGAACTGGGAGTAGAAAGAGTTCAAGTTATTGGTGAATAATAATTATTTGTAATCAAAAGAGAAAAAAAAAAAAAAAATAGATAGGTAGACAGACAGATTAATAGATAGATTGATTGATAGGTCTGAAAGATGTAATACTATTGTAATGTATCAATCCTTCCATTATTTGCAGTACATCCCGTCTTGTCTCTATCCTGTGTGAAGAGGCCTGATGGACCTCCCATGATTCTGTGCTCTGTGGGATTTTACCATGATTCTCTTGAACAGCTGTGGATCAGAGATGGAGACGTCCTCAACAGTTCATACTCAAACAAATCATTCAATGGATTCTTTAATCAGAAATCATACCTTATACTGCCGCCACAAACCTTCAATGACACAATCTACTCCTGCTGGGTAAACCACTCGTCATTAAACAAACCACTTGTGGCCAATTTATCAAGCTCTGTCTGCTATGAACGAGGGGATTTAACTGTGGCTCTGGCAGTGGCTTTTGTCATCTCTGCGGTGTTGACTGTCTTTTTGATCATCGTAGTCGTGTAAATGTTACATGAAGAACGCGAAATAGAATGGAGAACGGTGTTCTGAAGACCTGTCTTGCTACCTTGAAGGACACAAGGACACAGAATGTCCTGTGATCTTGTTTCTCATCTGACCATCCTATCACATTTTATGTATAAGAGTAACAGGACCACCCAATGCATAATAAATAAAACATAACATAACACAGATGTCATAACCCATTAAAACATTTACTTAAATTATTTTTTTATATTTCATGTCTTTTTATTTTATTATTAAAATGTATGAGTGTGTAAATGAGTTTGTATATTTTAATGTTAAGACTCTTTTTAATACACCAATAAAGAACTGCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490271 True 3149 lncRNA 0.38 4 13510079 13513826

Neighbor

gene id symbol gene type direction distance location
CI01000304_13479162_13481853 BTG3 coding downstream 27785 13478741 ~ 13482294 (-)
CI01000304_13444023_13466208 CLTCB, CLTCA, CLTC coding downstream 43871 13444023 ~ 13466208 (-)
CI01000304_13406343_13432947 NA coding downstream 76468 13403026 ~ 13433611 (-)
CI01000304_13367200_13384209 NA coding downstream 125541 13365346 ~ 13395129 (-)
CI01000304_13342458_13361412 RPS6KB1A coding downstream 148667 13342420 ~ 13361412 (-)
CI01000304_13517595_13527868 NA coding upstream 3350 13517176 ~ 13527868 (-)
CI01000304_13529418_13530787 NA coding upstream 15304 13529130 ~ 13530787 (-)
CI01000304_13532811_13534129 NA coding upstream 18985 13532811 ~ 13534129 (-)
CI01000304_13541959_13564807 NA coding upstream 27399 13541225 ~ 13564807 (-)
CI01000304_13692322_13711234 ALCAMA coding upstream 178132 13691958 ~ 13711234 (-)
G427055 NA non-coding downstream 4007 13505845 ~ 13506072 (-)
G427052 NA non-coding downstream 7664 13502150 ~ 13502415 (-)
G427050 NA non-coding downstream 10815 13499032 ~ 13499264 (-)
G427049 NA non-coding downstream 23994 13485756 ~ 13486085 (-)
G427064 NA non-coding upstream 75321 13589147 ~ 13589370 (-)
G427076 NA non-coding upstream 95560 13609386 ~ 13609600 (-)
G427077 NA non-coding upstream 98312 13612138 ~ 13613990 (-)
G427130 NA non-coding upstream 267979 13781805 ~ 13782038 (-)
G427057 NA other downstream 2157 13507641 ~ 13507922 (-)
G426147 NA other downstream 470764 12719497 ~ 12805926 (-)
CI01000304_12559311_12559998 NA other downstream 949944 12558854 ~ 12560135 (-)
G426106 NA other downstream 1169851 12336701 ~ 12340228 (-)
G425580 NA other downstream 1637173 11868677 ~ 11872906 (-)
G427154 NA other upstream 417965 13931791 ~ 13950548 (-)
G427309 NA other upstream 675642 14181932 ~ 14237078 (-)
CI01000304_14265881_14269102 NA other upstream 754597 14265476 ~ 14269571 (-)
CI01000304_14286960_14294449 NA other upstream 769845 14286960 ~ 14294449 (-)
G427423 NA other upstream 847622 14361448 ~ 14361892 (-)

Expression


Co-expression Network