G426498


Basic Information

Item Value
gene id G426498
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13514906 ~ 13515832 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489727
ACCCCATAGAAAATCTATGGGGTATTGTGAAGAGGAAGATGCGATATGCCAGACCCAACAATGCAGAAGAGCTGAAGGCCACTATCAGAGCAACCTGGGCTCTAATAACACCTGAGCAGTGCCACAGACTGATCGACTCCATGCCACACCGCATTGCTGCAGTAATTCAGGCAAAAGGAGCCCCAACTAAGTAATGAGTGCTGTACATGCTCATACTTTTCATGTTCATACTTTTCAGTTGGCCAAGATTTCTAAAAATACTTTCTTTGTATTGGTCATTAGTAATATTCTAATTTTCTGAGATACTGAATTTGGGATTTTCCTTAGTTGTCAGTTATAATCATCAAAATTAAAAGAAATAAACATTTGAAACATATCAGTCTGTGTGTAATGAATGAATATAATATACAAGTTTCACTTTTTGAATGGAATTAGTGAAATAAATCAACTTTTTGATGATATTCTAATTATATGACCAGCACCTGTATATATATATATATATATATATATATATTTGTATATAACAATTATTTCCATGGTGAAAAAAACCTAAACATTTTGAGCAGTGTGGCTCACACAATGACAAAAAACACTTTTTATTTTGGTAGCATTGGCCAATGTACTGACACAAAAACTACATTTTGACGCATGAATTAAATGTTTTGGGTGAGTTACTACATTTTGCAGACAAGCAATAGAGTTCTGATGTTCCAGTAAGCAGTTGTGAAATTTGCACTTACAGTTTAGAGAATGTTTCGGAAATGTGCCAAAGCGATCAAGAAAAACTATATAAAATCTCTAATGACTATACTATGCAAAAATGAGAGAGTTACTGTAAATAGAGAGGTATATTGGGATAGTTCACCCAAAAATGAAAATTGAAAAAATAATTTACTCACCCTCAAGTTGTTCCAAACTATAAATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489727 True 927 lncRNA 0.33 1 13514906 13515832

Neighbor

gene id symbol gene type direction distance location
CI01000304_13435609_13438459 PTRH2 coding upstream 76176 13435507 ~ 13438730 (+)
CI01000304_13331382_13338351 RNFT1 coding upstream 175658 13331382 ~ 13339248 (+)
CI01000304_12828251_12839287 NA coding upstream 674915 12827314 ~ 12839991 (+)
CI01000304_12819247_12825161 NA coding upstream 689593 12817979 ~ 12825313 (+)
CI01000304_12744525_12773999 NA coding upstream 740594 12744059 ~ 12774312 (+)
CI01000304_13578347_13595075 NA coding downstream 62217 13578049 ~ 13595097 (+)
CI01000304_13613026_13686604 CBLB coding downstream 97194 13613026 ~ 13686604 (+)
CI01000304_13731299_13731640 NA coding downstream 215410 13731242 ~ 13731650 (+)
CI01000304_13744571_13748279 NA coding downstream 227843 13743675 ~ 13748318 (+)
CI01000304_13932457_13932762 NA coding downstream 416117 13931949 ~ 13933084 (+)
G426497 NA non-coding upstream 9764 13504792 ~ 13505142 (+)
G426495 NA non-coding upstream 28690 13485979 ~ 13486216 (+)
G426494 NA non-coding upstream 28949 13485732 ~ 13485957 (+)
G426493 NA non-coding upstream 29328 13485377 ~ 13485578 (+)
G426492 NA non-coding upstream 29903 13484632 ~ 13485003 (+)
G426360 NA non-coding downstream 3592 13519424 ~ 13533081 (+)
G426369 NA non-coding downstream 4053 13519885 ~ 13525938 (+)
G426380 NA non-coding downstream 30730 13546562 ~ 13550083 (+)
G426512 NA non-coding downstream 58679 13574511 ~ 13575026 (+)
G426518 NA non-coding downstream 65005 13580837 ~ 13581043 (+)
G425718 NA other upstream 1075820 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 2959202 10555216 ~ 10572164 (+)
G424251 NA other upstream 3322011 10188822 ~ 10189404 (+)
G424246 NA other upstream 3387584 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 3949333 9561005 ~ 9565778 (+)
G426312 NA other downstream 814216 14330048 ~ 14330886 (+)
G426828 NA other downstream 1433058 14948890 ~ 14950592 (+)
G427860 NA other downstream 2369622 15885454 ~ 15889591 (+)
G428017 NA other downstream 2567398 16083230 ~ 16083714 (+)

Expression


Co-expression Network