G426360


Basic Information

Item Value
gene id G426360
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13519424 ~ 13533081 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489586
TTGTCAGAAGTATGCTGTGAGGGGAGTTGTATACTTTTTTGGGTTTGGCTATTTGAGTAGTTAGCATGGCAGGTGATTGTTTCTCCATCACTCCAGTCAGGTTTACACAGATGCAGCTCACTGTTCATGTCATAAGATGTGGATGGATGAAGTAAACTTTGACCCTCTCGGCTCCAGGTGAAGTCCACCAGCTCAGGGTTCAGACTCTTCAGAGAGCAAAGCAGATGAATACAGGTGTCATTACTGCTGTTCAGGAGCTGCAGGGACAGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489586 True 272 lncRNA 0.47 2 13519424 13533081

Neighbor

gene id symbol gene type direction distance location
CI01000304_13435609_13438459 PTRH2 coding upstream 80694 13435507 ~ 13438730 (+)
CI01000304_13331382_13338351 RNFT1 coding upstream 180176 13331382 ~ 13339248 (+)
CI01000304_12828251_12839287 NA coding upstream 679433 12827314 ~ 12839991 (+)
CI01000304_12819247_12825161 NA coding upstream 694111 12817979 ~ 12825313 (+)
CI01000304_12744525_12773999 NA coding upstream 745112 12744059 ~ 12774312 (+)
CI01000304_13578347_13595075 NA coding downstream 44968 13578049 ~ 13595097 (+)
CI01000304_13613026_13686604 CBLB coding downstream 79945 13613026 ~ 13686604 (+)
CI01000304_13731299_13731640 NA coding downstream 198161 13731242 ~ 13731650 (+)
CI01000304_13744571_13748279 NA coding downstream 210594 13743675 ~ 13748318 (+)
CI01000304_13932457_13932762 NA coding downstream 398868 13931949 ~ 13933084 (+)
G426498 NA non-coding upstream 3592 13514906 ~ 13515832 (+)
G426497 NA non-coding upstream 14282 13504792 ~ 13505142 (+)
G426495 NA non-coding upstream 33208 13485979 ~ 13486216 (+)
G426494 NA non-coding upstream 33467 13485732 ~ 13485957 (+)
G426493 NA non-coding upstream 33846 13485377 ~ 13485578 (+)
G426380 NA non-coding downstream 13481 13546562 ~ 13550083 (+)
G426512 NA non-coding downstream 41430 13574511 ~ 13575026 (+)
G426518 NA non-coding downstream 47756 13580837 ~ 13581043 (+)
G426377 NA non-coding downstream 82906 13615987 ~ 13618730 (+)
G426348 NA non-coding downstream 147544 13680625 ~ 13689596 (+)
G425718 NA other upstream 1080338 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 2963720 10555216 ~ 10572164 (+)
G424251 NA other upstream 3326529 10188822 ~ 10189404 (+)
G424246 NA other upstream 3392102 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 3953851 9561005 ~ 9565778 (+)
G426312 NA other downstream 796967 14330048 ~ 14330886 (+)
G426828 NA other downstream 1415809 14948890 ~ 14950592 (+)
G427860 NA other downstream 2352373 15885454 ~ 15889591 (+)
G428017 NA other downstream 2550149 16083230 ~ 16083714 (+)

Expression


Co-expression Network