G426380


Basic Information

Item Value
gene id G426380
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13546562 ~ 13550083 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489606
GATGTGATGTCAGTTTCCATACATGCAATGCACTTACCCTTGCAGGTTTTGGGTGGTTCAGGAGGGCAGGATGAACTGTTTTTTTTCTTCTTGATGACCGCCACACTCTTTTTGTCAAATGTCAGGGGGCTGTACTGCGATTCAGTGATGTGATGGAGAAATTACAGCTCACCCCGGGGTGGTTTCCTCCTTAGACTTGGACTTCTTGAGCTTTTTTGGGTTGCTGGTAGCAGCTTGAGCAAATCCCCAGCTTTCATCATTCCAGCCGCCCTCATGATCGGACACACTGCCTCGAATGGAACCTCTTTTCCCTAGAAAACAGATCAGCAGCCCAAACAGCACTTTTTTTTAATTCACTGTATCAAATGTTTTTAGTTTAAATATGAATCATGAGATAATGAGATAATGGTCAACTGAATCAAGTATTATTTTAGTTTTATGTTTGTTGCTTTATAGATTGTAATTTTTATTTTTATTTGAGCATCTTGACCTGTACAGCACTTTGGTCAACCTTGGGTTGTTTTTAAATGTGCTTTATAAATAAATAATGAAAATTAAATGAAATAAAGTGAAAATTCTAAATGATATTCAGTTTGAGTTAAAGAAATGTCATTGAAATTGTACTTCAAACTTACAGTGGGTGTAACATTGGAAAGCACTTCCTTAGAAAACGCTAGAAAGCACAATTTAAAGACTTTTTGTAGTGTTGTCATTTCTGCAGAATAACACATGGGCAATAAATGAGGAAGTATGTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489606 True 758 lncRNA 0.37 2 13546562 13550083

Neighbor

gene id symbol gene type direction distance location
CI01000304_13435609_13438459 PTRH2 coding upstream 107832 13435507 ~ 13438730 (+)
CI01000304_13331382_13338351 RNFT1 coding upstream 207314 13331382 ~ 13339248 (+)
CI01000304_12828251_12839287 NA coding upstream 706571 12827314 ~ 12839991 (+)
CI01000304_12819247_12825161 NA coding upstream 721249 12817979 ~ 12825313 (+)
CI01000304_12744525_12773999 NA coding upstream 772250 12744059 ~ 12774312 (+)
CI01000304_13578347_13595075 NA coding downstream 27966 13578049 ~ 13595097 (+)
CI01000304_13613026_13686604 CBLB coding downstream 62943 13613026 ~ 13686604 (+)
CI01000304_13731299_13731640 NA coding downstream 181159 13731242 ~ 13731650 (+)
CI01000304_13744571_13748279 NA coding downstream 193592 13743675 ~ 13748318 (+)
CI01000304_13932457_13932762 NA coding downstream 381866 13931949 ~ 13933084 (+)
G426360 NA non-coding upstream 13481 13519424 ~ 13533081 (+)
G426369 NA non-coding upstream 20624 13519885 ~ 13525938 (+)
G426498 NA non-coding upstream 30730 13514906 ~ 13515832 (+)
G426497 NA non-coding upstream 41420 13504792 ~ 13505142 (+)
G426495 NA non-coding upstream 60346 13485979 ~ 13486216 (+)
G426512 NA non-coding downstream 24428 13574511 ~ 13575026 (+)
G426518 NA non-coding downstream 30754 13580837 ~ 13581043 (+)
G426377 NA non-coding downstream 65904 13615987 ~ 13618730 (+)
G426348 NA non-coding downstream 130542 13680625 ~ 13689596 (+)
G426526 NA non-coding downstream 189617 13739700 ~ 13741560 (+)
G425718 NA other upstream 1107476 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 2990858 10555216 ~ 10572164 (+)
G424251 NA other upstream 3353667 10188822 ~ 10189404 (+)
G424246 NA other upstream 3419240 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 3980989 9561005 ~ 9565778 (+)
G426312 NA other downstream 779965 14330048 ~ 14330886 (+)
G426828 NA other downstream 1398807 14948890 ~ 14950592 (+)
G427860 NA other downstream 2335371 15885454 ~ 15889591 (+)
G428017 NA other downstream 2533147 16083230 ~ 16083714 (+)

Expression


Co-expression Network