G426526


Basic Information

Item Value
gene id G426526
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13739700 ~ 13741560 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489755
AGTAATTTCACTTTAATGGCAATGAAAAGGTTATTAGCCAGTTATTGAAATGCCTTATTTTCAAAAATGTCACTTTAGTAAATTCATTGGTATTTAACAAATTTGACTGTCTTTTGCTGCAAAACCAGCTAAGTCTACGTGTGCTTTTTTCACAAAAACCTCCAAGTCCATCTCTTTGGACAACAAGACAAAGGGAAGTGGTGTTTAGTGGTTTCTGCCAACGAACCAGTATTTCTGAATGGGCTGACGGTGAGATTTAGTGGATTTGAAGCGAAAGTATTTGATGAACATATGAGCATTCGCTCAATATCAGTATCTCATTTTTGCCGGAGGTGGCGTTTAGTGTCTTTTGCATCTGAACTCTTCACATGTACGGGATGACAATTGTGATGATTTACCTAGGATACTGGAATCCATTGCAAGTGGCGCAATGTAACACAGTTGTTTGGTTTTTTAAGTAAAGGTGGGACAAGTGAAAATGTATTTTTGTGGTAGTAAACATTATGCCACAAGTGCTGTCAATTGATCTTAACTTGTAATGAACCCGGATTACTTTAATCTAAATTAACTGTAGTAAAGGATCAAAGTGCTTCCTGCTTCCGAAATGCAGAACGGACAAAAAAACGCCCTCCCAAGAGAGGCCAAAGTCTATGATTTTGTCTGTTTGCAAGCGAGAGAAAGTGAATTTTATTTGTGTTTGACCTCCATATGGGCCAGGCTTCTGTAACAGAACCTGTGTTGATCTCAAAACTCTCTTAAAGAGCAAGTGTTTGTCATTAGGAGGAACTCTGCTCCTGTTAGTCCTCAGAGATCACATCAAAACCCCCATTCACCTCGAAACACCCCTATCCCTCAGCATAGGGACCAAATGCTGATAACCACGAAAGGATTAAAACCAGGCTGACAGAAACAATCCTCAGCCTTCTCAGAGTTACCGACCCGGGGAAGGTCATCGTTAAAAATCAACCACAAGAGACGAAACACAGAGGCCGGTTGAGAGCTTGTTAAAAGAAGTTCTGCTATAAGATCACTGTTTATCTTTTTAGCGCAGGATTATAATTCATATTAACAACAGCAATCAGCTTGAGTATCGACAGATTACATTAACATAGTTTATATAAAAAGAAATTGGCCAATGCTATGTAAAACCAACTTTTTTAAAATAAAAAACCTTGGACGCTTGCTGTTTCTAATCCACTTGCCAAATGCTTTTCTTTATGGTGTTAATATGAGTTAATTCATTATATTTATCAAACCCTTTTAACATTAATTAAATAGTTATATATAAGTATTTTTATTTGTCATTTTGAAAAGTGATTTACCAATAATAATTTATTATTAAACTTTTAAGAGTATATTTAAATACATTTTATACATTCATTAAATAAACATGTCTATTTAATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489755 True 1405 lncRNA 0.36 2 13739700 13741560

Neighbor

gene id symbol gene type direction distance location
CI01000304_13731299_13731640 NA coding upstream 8050 13731242 ~ 13731650 (+)
CI01000304_13613026_13686604 CBLB coding upstream 53096 13613026 ~ 13686604 (+)
CI01000304_13578347_13595075 NA coding upstream 144603 13578049 ~ 13595097 (+)
CI01000304_13435609_13438459 PTRH2 coding upstream 300970 13435507 ~ 13438730 (+)
CI01000304_13331382_13338351 RNFT1 coding upstream 400452 13331382 ~ 13339248 (+)
CI01000304_13744571_13748279 NA coding downstream 2115 13743675 ~ 13748318 (+)
CI01000304_13932457_13932762 NA coding downstream 190389 13931949 ~ 13933084 (+)
CI01000304_13947668_13967998 PICALMA, PICALM, PICA coding downstream 204598 13946158 ~ 13969190 (+)
CI01000304_13989055_14004354 SYTL2A coding downstream 247495 13989055 ~ 14004526 (+)
CI01000304_14005720_14006514 CREBZF coding downstream 264160 14005720 ~ 14006860 (+)
G426348 NA non-coding upstream 50104 13680625 ~ 13689596 (+)
G426377 NA non-coding upstream 120970 13615987 ~ 13618730 (+)
G426518 NA non-coding upstream 158657 13580837 ~ 13581043 (+)
G426512 NA non-coding upstream 164674 13574511 ~ 13575026 (+)
G426380 NA non-coding upstream 189617 13546562 ~ 13550083 (+)
G426592 NA non-coding downstream 131345 13872905 ~ 13873118 (+)
G426307 NA non-coding downstream 235405 13976965 ~ 13978162 (+)
G426362 NA non-coding downstream 310188 14051748 ~ 14062044 (+)
G426375 NA non-coding downstream 343478 14085038 ~ 14095622 (+)
G426352 NA non-coding downstream 374189 14115749 ~ 14123481 (+)
G425718 NA other upstream 1300614 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 3183996 10555216 ~ 10572164 (+)
G424251 NA other upstream 3546805 10188822 ~ 10189404 (+)
G424246 NA other upstream 3612378 10116343 ~ 10127322 (+)
G426312 NA other downstream 588488 14330048 ~ 14330886 (+)
G426828 NA other downstream 1207330 14948890 ~ 14950592 (+)
G427860 NA other downstream 2143894 15885454 ~ 15889591 (+)
G428017 NA other downstream 2341670 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 2763302 16504764 ~ 16513625 (+)

Expression


Co-expression Network