G427154


Basic Information

Item Value
gene id G427154
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 13931791 ~ 13950548 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490444
CTTTGGCCCCATGACTTCGTGCGTGGTCGCCTTGCACACCGTTTTGGACACCGCGGAACCGGTAACACTGTGTTGCGCTGCCGTTATCCGATCCGTTATGCTTTGTCCAGACATCCTCGCAGTTTTAAACAAACAGAAAAAGGGGAAAAACAACAAAAGAGGGGGGGAAATCTACTCGGGCTGCTAAATCCAACGGCAATGCTGGCAGTCCCTGGGATGTGCACTGTTCCGCCACCTGACTGGGGAAGAAAGAGAGAAAAGAAATGAGATTGCAAGTAAGACGCATCCGGCGCTTAAGAGAGTCCAAATGAAGTTTGCTCTGTATGTATAACGTCAGCTGATCGCGACATTTACGTACCAAACGTTTCCTCCTCTATTAACAGCAGCGTCCTCTCTCTCTCTCTCTCTCTCAACCCCTCTGTCACGCACTCTCCCTCGCCCTCTCCTCTCCCCCTCTCTCTCTCTAACTCCCCCTTTTTCCTCCTCAATGGCTCTCCTCTCGGATCTTGCCTCCCCCTGCTGGGTTTAAAAGGCTCGTAGGAAAATGGCGGGTGTGTTTCCTCTTTTCAGAGGATCCTCCCAAGGTTTATATGGATGTTGGATGGTCTGTGTGTAACGACGCCATGTTGGCTCTAACCATCAGGCTGGGGTCCTCACACTACATATGAAGTGAGTACTACGATTTGGCTTGTGAGCCAAAATGGCGGCTCTAGATGGACAGTTTCTATGTATTATCTACCAGGGCGACGGTT
>TU490446
TCTAATGTAATCGCTCAGTGTTTCAGTGCACTTCTCCAATCATTTAGTCTGTTTAAACTCCATCCCTCCACAGTCAAAATCCAAATGCTTCTTCTTTGGCCCCATGACTTCGTGCGTGGTCGCCTTGCACACCGTTTTGGACACCGCGGAACCGGTAACACTGTGTTGCGCTGCCGTTATCCGATCCGTTATGCTTTGTCCAGACATCCTCGCAGTTTTAAACAAACAGAAAAAGGGGAAAAACAACAAAAGAGGGGGGGAAATCTACTCGGGCTGCTAAATCCAACGGCAATGCTGGCAGTCCCTGGGATGTGCACTGTTCCGCCACCTGACTGGGGAAGAAAGAGAGAAAAGAAATGAGATTGCAAGTAAGACGCATCCGGCGCTTAAGAGAGTCCAAATGAAGTTTGCTCTGCTCGTAGGAAAATGGCGGGTGTGTTTCCTCTTTTCAGAGGATCCTCCCAAGGTTTATATGGATGTTGGATGGTCTGTGTGTAACGACGCCATGTTGGCTCTAACCATCAGGCTGGGGTCCTCACACTACATATGAAGTGAGTACTACGATTTGGCTTGTGAGCCAAAATGGCGGCTCTAGATGGACAGTTTCTATGTATTATCTACCAGGGCGACGGTT
>TU490448
GATAGCAACGTAGTACAAAATCCCATGACACTTACAATCCAAATGCTTCTTCTTTGGCCCCATGACTTCGTGCGTGGTCGCCTTGCACACCGTTTTGGACACCGCGGAACCGGTAACACTGTGTTGCGCTGCCGTTATCCGATCCGTTATGCTTTGTCCAGACATCCTCGCAGTTTTAAACAAACAGAAAAAGGGGAAAAACAACAAAAGAGGGGGGGAAATCTACTCGGGCTGCTAAATCCAACGGCAATGCTGGCAGTCCCTGGGATGTGCACTGTTCCGCCACCTGACTGGGGAAGAAAGAGAGAAAAGAAATGAGATTGCAAGTAAGACGCATCCGGCGCTTAAGAGAGTCCAAATGAAGTTTGCTCTGCTCGTAGGAAAATGGCGGGTGTGTTTCCTCTTTTCAGAGGATCCTCCCAAGGTTTATATGGATGTTGGATGGTCTGTGTGTAACGACGCCATGTTGGCTCTAACCATCAGGCTGGGGTCCTCACACTACATATGAAGTGAGTACTACGATTTGGCTTGTGAGCCAAAATGGCGGCTCTAGATGGACAGTTTCTATGTATTATCTACCAGGGCGACGGTT
>TU490449
CTTTGGCCCCATGACTTCGTGCGTGGTCGCCTTGCACACCGTTTTGGACACCGCGGAACCGGTAACACTGTGTTGCGCTGCCGTTATCCGATCCGTTATGCTTTGTCCAGACATCCTCGCAGTTTTAAACAAACAGAAAAAGGGGAAAAACAACAAAAGAGGGGGGGAAATCTACTCGGGCTGCTAAATCCAACGGCAATGCTGGCAGTCCCTGGGATGTGCACTGTTCCGCCACCTGACTGGGGAAGAAAGAGAGAAAAGAAATGAGATTGCAAGCTCGTAGGAAAATGGCGGGTGTGTTTCCTCTTTTCAGAGGATCCTCCCAAGGTTTATATGGATGTTGGATGGTCTGTGTGTAACGACGCCATGTTGGCTCTAACCATCAGGCTGGGGTCCTCACACTACATATGAAGTGAGTACTACGATTTGGCTTGTGAGCCAAAATGGCGGCTCTAGATGGACAGTTTCTATGTATTATCTACCAGGGCGACGGTT
>TU490450
CTTTGGCCCCATGACTTCGTGCGTGGTCGCCTTGCACACCGTTTTGGACACCGCGGAACCGGTAACACTGTGTTGCGCTGCCGTTATCCGATCCGTTATGCTTTGTCCAGACATCCTCGCAGTTTTAAACAAACAGAAAAAGGGGAAAAACAACAAAAGAGGGGGGGAAATCTACTCGGGCTGCTAAATCCAACGGCAATGCTGGCAGTCCCTGGGATGTGCACTGTTCCGCCACCTGACTGGGGAAGAAAGAGAGAAAAGAAATGAGATTGCAAGTAAGACGCATCCGGCGCTTAAGAGAGTCCAAATGAAGTTTGCTCTGCTCGTAGGAAAATGGCGGGTGTGTTTCCTCTTTTCAGAGGATCCTCCCAAGGTTTATATGGATGTTGGATGGTCTGTGTGTAACGACGCCATGTTGGCTCTAACCATCAGGCTGGGGTCCTCACACTACATATGAAGTGAGTACTACGATTTGGCTTGTGAGCCAAAATGGCGGCTCTAGATGGACAGTTTCTATGTATTATCTACCAGGGCGACGGTT
>TU490469
CTTTGGCCCCATGACTTCGTGCGTGGTCGCCTTGCACACCGTTTTGGACACCGCGGAACCGGTAACACTGTGTTGCGCTGCCGTTATCCGATCCGTTATGCTTTGTCCAGACATCCTCGCAGTTTTAAACAAACAGAAAAAGGGGAAAAACAACAAAAGAGGGGGGGAAATCTACTCGGGCTGCTAAATCCAACGGCAATGCTGGCAGTCCCTGGGATGTGCACTGTTCCGCCACCTGACTGGGGAAGAAAGAGAGAAAAGAAATGAGATTGCAAGTAAGACGCATCCGGCGCTTAAGAGAGTCCAAATGAAGTTTGCTCTGTATGTATAACGTCAGCTGATCGCGACATTTACGTACCAAACGTTTCCTCCTCTATTAACAGCAGCGTCCTCTCTCTCTCTCTCTCTCTCAACCCCTCTGTCACGCACTCTCCCTCGCCCTCTCCTCTCCCTCTCTCTCTCTCAAACTCCCCCTTTTTCCTCCTCAATGGCTCTCCTCTCGGATCTTGCCTCCCCCTGCTGGGTTTAAAAGGCTCGTAGGAAAATGGCGGGTGTGTTTCCTCTTTTCAGAGGATCCTCCCAAGGTTTATATGGATGTTGGATGGTCTGTGTGTAACGACGCCATGTTGGCTCTAACCATCAGGCTGGGGTCCTCACACTACATATGAAGTGAGTACTACGATTTGGCTTGTGAGCCAAAATGGCGGCTCTAGATGGACAGTTTCTATGTATTATCTACCAGGGCGACGGTT
>TU490473
TGGGAAAAGCCTTGGGTAAATAAAACCACTAGTGCTTTATTTAAGCTGAAAGTCGGCCATGTTGCCGAACAGGTCCCAAAAGGGATTTCAGGGAGAGAAGAGCAAACAGACAGACAGAGAAATAGCGAGAAACAGGACCTAATGCTTCCACTGCAGACCCTCCAACACCACATCTGACCATGACTAACATTAAAATGATAGAACTGTGAAAACTGTGCAGAGCATGTTCTGTCAGCTTCTCAAATATTCATCATGTCTGCATTTGTCATAGGTTTATTGCTCATGAAAATGGATGACGCAGCTGCAATGTGTTTGGAATAACAGAATGAGTAATGAAGTGTCGGGCTGAAAGTACCTACCTTGTAACCCGCTTTTGTCCAAAAAATTACTGAGGTTGAATAATGTGTTCCTAGAGGCCAGATATTGTACAAATCTCTCATTGCCGTAGACCATAAGGTGGTGTGTGGTGATGAGAGATTTGAACACGACCACCCAGCTGGTGTTGGTGGTGCGCTCAAACAGCGTGTCGGCCAGCTGAGGGATGTTGACATTCATCTCGTTGGTGCACTGGATCAGATAATCCAAATGCTTCTTCTTTGGCCCCATGACTTCGTGCGTGGTCGCCTTGCACACCGTTTTGGACACCGCGGAACCGGTAACACTGTGTTGCGCTGCCGTTATCCGATCCGTTATGCTTTGTCCAGACATCCTCGCAGTTTTAAACAAACAGAAAAAGGGGAAAAACAACAAAAGAGGGGGGGAAATCTACTCGGGCTGCTAAATCCAACGGCAATGCTGGCAGTCCCTGGGATGTGCACTGTTCCGCCACCTGACTGGGGAAGAAAGAGAGAAAAGAAATGAGATTGCAAGTAAGACGCATCCGGCGCTTAAGAGAGTCCAAATGAAGTTTGCTCTGCTCGTAGGAAAATGGCGGGTGTGTTTCCTCTTTTCAGAGGATCCTCCCAAGGTTTATATGGATGTTGGATGGTCTGTGTGTAACGACGCCATGTTGGCTCTAACCATCAGGCTGGGGTCCTCACACTACATATGAAGTGAGTACTACGATTTGGCTTGTGAGCCAAAATGGCGGCTCTAGATGGACAGTTTCTATGTATTATCTACCAGGGCGACGGTT
>TU490466
GGACAATAAACAGAAAATCTGAATCACTTGGACTGCTTCCCCACTGGACTTTTCCATATTTAGACAGTAATGTTCAGAATGAAGTAGCATGTCTGCTGTGCGAACAAAACTCTGCTGATTAGACTCAAGGAGTTTTGACTCATGAATTTCCCCTGATCCAGCTCTTGATGGAAGAGTCACTGCACTCTCCTATCTGCAGACATCTCCCGTTTAATCAGCTCCCAACATTTTTCTGATTTACGGAACAACTTCCTGTTGGCTGTTTAGATTTTGAATAGTTGGCGGCCTACAAGAATGCAGGAAGTATCTTGAACTGGTCCACTGGGTTCATCCAGGACAAGACACTTTGCAGTCTGGAGTTTGGGAGGCGTCTGGGAGCAGGAATGCTGATCAACTCCCTGTTCTAACTCAATGAAAAAAAAAAAAAAATTGTCAAAGTTATTATGAAATTAAAACAATAAATCCCATTATGGTGCTCTTTAATGTGGTGCGCATGTAAATCGACCAGCTCTTTGTCTTTACTACTAGTTATAGCATGAAATAAACATGAATGAACATCAGAAATTATGCTGAAAGAAACAATACAACTTACCAAAATGTATCATGTCTAATGTAATCGCTCAGTGTTTCAGTGCACTTCTCCAATCATTTAGTCTGTTTAAACTCCATCCCTCCACAGTCAATTGCAAGTTCACACACAGTTTTGGCCTAATGGTTAGAGAGTCAGACTTGTAACCCAAAAGGTCATGGGTTCGAGTCTCAGTACTGGCAGGAAATGTAGGTGGGCGGAGTGAATGAACAGTGCTCACTTCCACTCTCATTACCAGAAACTGAGGTGCTCTTGAACCCCCAATCACTCTCCAGGTGCCACAGCAAAAAAAAAAAAAAAGGCAGCCTACTGTTCACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCAACACTCACTGCTGTGTGTGTGTGCACCTAGATGGGTGAAATGCAGAGCACAATTTCCAAGTATGGGACACCATACTTGGCCACATGTCACTTGCACTTTTCAAAATCTAATCAAAAACTGATGGGCATTTTTTTCTTTTTTCTTCTTTTTTGATAATACTTACACTCAGATGTATTATTAGCAGCTAAAGTCAGCACTGTCATTTAAAGTTGCCCTCACTAAATACTACCAATACTAGTTTAGAAAAAACTTATTCTGGAACTGCTTTGTGATGCTTGGTGAGTGCAACTTAACAGAACGGTCTGTCCATGCCCTAAATTTCAGTCATCCATTGCTCAAAAAGTGGTAAGGAGGGCGTCGTAACCTTTCTATCTCTGCTGTATTTGGGTTGTTGTGACTAGTTACATAATATTTGATCACTTAAAACCGGTGAGGTAAAGAGGCACTTTGCTAATGGCATACTGGGTCAATAATTTAGGAAATGGAACATGAAGAAAGTCAACTACAAATGCTTTAGAGCCAGGCTCAGCTAGGAGGTTCAAACAGTGACTCTAAAAGCAGTACTGGTCTCCATTCACACACAGCAGGGTAGCGAGTCAGCACTCTTTCTTGACTGACTGTCATTTGATGCCTCTCAGGTCACATGCTACATTTCTACACAGGTACAGACACACACAGTCGCATGACTGACTTACAGCGGATCTCTGCCAGAGTGATCGGACACCATAAAACAGGTCCAAGGGGTCACTTTGTTGAAACAGATGACATTTTATGGGTGTTGTAACCACGCTGATTGGATGGGAGCGTTACAGTCAACGCTACGCAAGCTTTTCCGCCCTACAAACTGGTAGACGCACAGACGCTCAGGGCGCTTTCGTTTTCGCAACCTCAAAATTGGGCTTAAGTGTGTATTTGCAAATATGGATACTAAACAGCAGGAACACCAATCAAGATGAGAGCACTTTAATCTACGATTATAACAAAACTGATCCGATTTCCACTGGCTGTCTGACGGTTCATCAGACAAGATGTATTTCACATTCTGAAAAACTTCAGCAGTAACCAGGCAGACAAAACGCCATATAATTTTTGTTTTGACTACATTCTGAACCAGCAATCATGTACACTGCGTGATAAACATTACATAATCGTGAACATTCTTCTACAGGCTGCTCAGAAAAGCTCTGCAGTTATAGGAAATAAATCTATCTGATGAAATAAAAATGAATAATGAGTTAATTCAATTCAAGAACTAATTTTGCTAGGAGTGTCTGTGTATCTAAAAACCATAAAGATAAGCGAGTGTGTGTGTGTGTGGGGGGGGGCATTTGGTCTCACGCAGATTCTAGGAAGCGTCTATCATATTGCAGAACTGACTCATATGAAGGAGCACCCAGAATAAGCCTTGATTCCACAGAACTTGCTTACACAGCACTGGGGCACAGAAGGCCAGCCAACATGACTTCAACAAGTCATGGAAATACAACAGTGGAAGGTCCGCTGTTGATGTTGGTGGTGTGTATATCTGTGATCACCTTTAAATAAATTCAGCAACTACCCATCCAATCTCTCGTGCTGAATCCACCAGTTTACATACACTAAACCAATGTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490444 False 752 lncRNA 0.51 2 13931791 13932570
TU490446 False 634 lncRNA 0.48 3 13931791 13938036
TU490448 False 592 lncRNA 0.49 2 13931791 13932621
TU490449 False 495 lncRNA 0.50 2 13931791 13932570
TU490450 False 541 lncRNA 0.50 2 13931791 13932570
TU490469 False 752 lncRNA 0.51 2 13931791 13932570
TU490473 False 1135 TUCP 0.47 4 13931791 13950548
TU490466 True 2556 lncRNA 0.41 2 13936059 13938642

Neighbor

gene id symbol gene type direction distance location
CI01000304_13914502_13920992 ZPLD1 coding downstream 10799 13913987 ~ 13920992 (-)
CI01000304_13903994_13909017 NA coding downstream 22774 13903716 ~ 13909017 (-)
CI01000304_13741930_13742220 NA coding downstream 188923 13741694 ~ 13742868 (-)
CI01000304_13692322_13711234 ALCAMA coding downstream 220557 13691958 ~ 13711234 (-)
CI01000304_13541959_13564807 NA coding downstream 366984 13541225 ~ 13564807 (-)
CI01000304_13979830_13985175 NA coding upstream 41148 13979790 ~ 13985589 (-)
CI01000304_14009988_14011059 TMEM126A coding upstream 71220 14009862 ~ 14011169 (-)
CI01000304_14223930_14229132 NA coding upstream 284525 14223167 ~ 14229166 (-)
CI01000304_14265881_14269102 NA coding upstream 326834 14265476 ~ 14269571 (-)
CI01000304_14271696_14274827 NA coding upstream 332611 14271253 ~ 14276042 (-)
G427144 NA non-coding downstream 61746 13869788 ~ 13870045 (-)
G427136 NA non-coding downstream 127063 13804466 ~ 13804728 (-)
G427130 NA non-coding downstream 149753 13781805 ~ 13782038 (-)
G427077 NA non-coding downstream 317801 13612138 ~ 13613990 (-)
G427076 NA non-coding downstream 322191 13609386 ~ 13609600 (-)
G427155 NA non-coding upstream 19017 13957659 ~ 13959624 (-)
G427174 NA non-coding upstream 38297 13976939 ~ 13978156 (-)
G427225 NA non-coding upstream 143733 14082375 ~ 14084375 (-)
G427309 NA non-coding upstream 243290 14181932 ~ 14237078 (-)
G427318 NA non-coding upstream 263695 14202337 ~ 14202991 (-)
G427057 NA other downstream 423869 13507641 ~ 13507922 (-)
G426147 NA other downstream 892476 12719497 ~ 12805926 (-)
CI01000304_12559311_12559998 NA other downstream 1371656 12558854 ~ 12560135 (-)
G426106 NA other downstream 1591563 12336701 ~ 12340228 (-)
G425580 NA other downstream 2058885 11868677 ~ 11872906 (-)
CI01000304_14286960_14294449 NA other upstream 345029 14286960 ~ 14294449 (-)
G427423 NA other upstream 422806 14361448 ~ 14361892 (-)
G427376 NA other upstream 1320322 15258964 ~ 15261405 (-)

Expression


Co-expression Network