G426678


Basic Information

Item Value
gene id G426678
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 14400544 ~ 14400954 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489908
CTGTGCCAAATACACTATTTCCGGTTTCGGAGAGTTTTTTTTGAGTGTGTCCTGTATGACGTCAAAAGACAGCGGAATTTCTTGTATAGACTTCTCCCTGATAAGTGTGCACACACACATCACCCAGAGCAAGAGCACACCTAGCCCATCAACGCGTTTCGTTCGGGATACGGAAGCCGAGAGATTTTCAACAATGGCTGTGTCCCAATTCAGGGGCTGCACCCTTTGAAGGCTGCATACATCAGCCTTGATTCTTTAGCTCCGCCCACGGCACTGATGGCAGGCACGCCTCCAGGAGCTCGGCTTTTTTCGGAAAGACTCGGTTTAGCGTATCTATCTTTTATAAATATGATAAAACTAAAGACTTTTTGGAGATATGAAGGATGCATTGTTACTCTAGATGTACTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489908 True 411 lncRNA 0.46 1 14400544 14400954

Neighbor

gene id symbol gene type direction distance location
CI01000304_14356867_14373980 NA coding upstream 25878 14356586 ~ 14374666 (+)
CI01000304_14352375_14355516 HSP70, HSP7C, HSPA8, HSPA1L.S coding upstream 45028 14352375 ~ 14355516 (+)
CI01000304_14331169_14331855 HIST1H2AD.L, HIST2H2AB, H2AFX.L, HIST1H2AH, HIST1H2AJ coding upstream 68571 14331064 ~ 14331973 (+)
CI01000304_14304022_14317252 HYOU1 coding upstream 82519 14304022 ~ 14318025 (+)
CI01000304_14231227_14261460 NA coding upstream 138381 14231073 ~ 14262163 (+)
CI01000304_14695603_14740389 NTM coding downstream 294649 14695603 ~ 14741079 (+)
CI01000304_15034188_15038152 TMEM218 coding downstream 631263 15032081 ~ 15038498 (+)
CI01000304_15040739_15045239 NA coding downstream 639598 15040552 ~ 15045257 (+)
CI01000304_15047768_15063987 ROBO4 coding downstream 646814 15047768 ~ 15064170 (+)
CI01000304_15140709_15147357 NA coding downstream 739607 15140561 ~ 15147557 (+)
G426676 NA non-coding upstream 1634 14398549 ~ 14398910 (+)
G426675 NA non-coding upstream 3925 14396383 ~ 14396619 (+)
G426379 NA non-coding upstream 112322 14274477 ~ 14288222 (+)
G426343 NA non-coding upstream 159113 14235877 ~ 14241431 (+)
G426679 NA non-coding downstream 340 14401294 ~ 14401558 (+)
G426680 NA non-coding downstream 2573 14403527 ~ 14403744 (+)
G426682 NA non-coding downstream 11941 14412895 ~ 14413095 (+)
G426683 NA non-coding downstream 13416 14414370 ~ 14414631 (+)
G426649 NA non-coding downstream 18161 14419115 ~ 14531423 (+)
G426312 NA other upstream 69658 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 821697 13578049 ~ 13595097 (+)
G425718 NA other upstream 1961458 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 3844840 10555216 ~ 10572164 (+)
G424251 NA other upstream 4207649 10188822 ~ 10189404 (+)
G426828 NA other downstream 547936 14948890 ~ 14950592 (+)
G427860 NA other downstream 1484500 15885454 ~ 15889591 (+)
G428017 NA other downstream 1682276 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 2103908 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 2354992 16761372 ~ 16765057 (+)

Expression


Co-expression Network