G426683


Basic Information

Item Value
gene id G426683
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 14414370 ~ 14414631 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU489913
TTTTAGGACTTCCGGTTCCATCGCCCCGAAGTCAATGGGTTTTTTTAATGGGTTTTTGCTAAATCGCCTGAAATAAGGTCTGTGGTTAACAAAGCCTCTAAATATTTTCACGTTTTGATCTATGACATAAAACACACCAGTTATAACCCGCTTGTGATTTTTTAAACCTTTATTGTGTCTTAAAAATGGCGGTTGCTAACAAATTGCTAAAAGGGACTACTTCCTTTGGTGGGGACTTTAGACGTCATCATGACAAACAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU489913 True 262 lncRNA 0.38 1 14414370 14414631

Neighbor

gene id symbol gene type direction distance location
CI01000304_14356867_14373980 NA coding upstream 39704 14356586 ~ 14374666 (+)
CI01000304_14352375_14355516 HSP70, HSP7C, HSPA8, HSPA1L.S coding upstream 58854 14352375 ~ 14355516 (+)
CI01000304_14331169_14331855 HIST1H2AD.L, HIST2H2AB, H2AFX.L, HIST1H2AH, HIST1H2AJ coding upstream 82397 14331064 ~ 14331973 (+)
CI01000304_14304022_14317252 HYOU1 coding upstream 96345 14304022 ~ 14318025 (+)
CI01000304_14231227_14261460 NA coding upstream 152207 14231073 ~ 14262163 (+)
CI01000304_14695603_14740389 NTM coding downstream 280972 14695603 ~ 14741079 (+)
CI01000304_15034188_15038152 TMEM218 coding downstream 617586 15032081 ~ 15038498 (+)
CI01000304_15040739_15045239 NA coding downstream 625921 15040552 ~ 15045257 (+)
CI01000304_15047768_15063987 ROBO4 coding downstream 633137 15047768 ~ 15064170 (+)
CI01000304_15140709_15147357 NA coding downstream 725930 15140561 ~ 15147557 (+)
G426682 NA non-coding upstream 1275 14412895 ~ 14413095 (+)
G426680 NA non-coding upstream 10626 14403527 ~ 14403744 (+)
G426679 NA non-coding upstream 12812 14401294 ~ 14401558 (+)
G426678 NA non-coding upstream 13416 14400544 ~ 14400954 (+)
G426676 NA non-coding upstream 15460 14398549 ~ 14398910 (+)
G426649 NA non-coding downstream 4484 14419115 ~ 14531423 (+)
G426644 NA non-coding downstream 19596 14434227 ~ 14438998 (+)
G426723 NA non-coding downstream 342453 14757084 ~ 14757737 (+)
G426740 NA non-coding downstream 420695 14835326 ~ 14841734 (+)
G426776 NA non-coding downstream 427178 14841809 ~ 14842084 (+)
G426312 NA other upstream 83484 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 835523 13578049 ~ 13595097 (+)
G425718 NA other upstream 1975284 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 3858666 10555216 ~ 10572164 (+)
G424251 NA other upstream 4221475 10188822 ~ 10189404 (+)
G426828 NA other downstream 534259 14948890 ~ 14950592 (+)
G427860 NA other downstream 1470823 15885454 ~ 15889591 (+)
G428017 NA other downstream 1668599 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 2090231 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 2341315 16761372 ~ 16765057 (+)

Expression


Co-expression Network