Gene
RNA
| Item | Value |
|---|---|
| gene id | G427570 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 14742982 ~ 14743303 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU490965 | True | 322 | lncRNA | 0.36 | 1 | 14742982 | 14743303 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_14381274_14385770 | LIM2.1 | coding | downstream | 357212 | 14380998 ~ 14385770 (-) |
| CI01000304_14377465_14379055 | BSX | coding | downstream | 363927 | 14376532 ~ 14379055 (-) |
| CI01000304_14333374_14339329 | ZPR1 | coding | downstream | 402864 | 14333182 ~ 14340118 (-) |
| CI01000304_14330462_14330842 | NA | coding | downstream | 412090 | 14330079 ~ 14330892 (-) |
| CI01000304_14318806_14323940 | NA | coding | downstream | 418200 | 14318639 ~ 14324782 (-) |
| CI01000304_14753489_14803322 | OPCML | coding | upstream | 10186 | 14753489 ~ 14803322 (-) |
| CI01000304_14834446_14835469 | NA | coding | upstream | 91111 | 14834414 ~ 14835549 (-) |
| CI01000304_14949765_14955677 | PANX3 | coding | upstream | 205884 | 14949187 ~ 14955677 (-) |
| CI01000304_14957226_14983228 | PKNOX2 | coding | upstream | 213300 | 14956603 ~ 14983228 (-) |
| CI01000304_15075003_15110723 | ROBO3 | coding | upstream | 330998 | 15074301 ~ 15110996 (-) |
| G427434 | NA | non-coding | downstream | 347158 | 14395544 ~ 14395824 (-) |
| G427424 | NA | non-coding | downstream | 378667 | 14364021 ~ 14364315 (-) |
| G427342 | NA | non-coding | downstream | 387172 | 14351932 ~ 14355810 (-) |
| G427341 | NA | non-coding | downstream | 410582 | 14331073 ~ 14332400 (-) |
| G427345 | NA | non-coding | downstream | 424939 | 14305217 ~ 14318043 (-) |
| G427574 | NA | non-coding | upstream | 100274 | 14843577 ~ 14843800 (-) |
| G427575 | NA | non-coding | upstream | 100742 | 14844045 ~ 14844379 (-) |
| G427579 | NA | non-coding | upstream | 113672 | 14856975 ~ 14857243 (-) |
| G427583 | NA | non-coding | upstream | 118097 | 14861400 ~ 14861868 (-) |
| G427588 | NA | non-coding | upstream | 172160 | 14915463 ~ 14915671 (-) |
| G427423 | NA | other | downstream | 381090 | 14361448 ~ 14361892 (-) |
| CI01000304_14286960_14294449 | NA | other | downstream | 455378 | 14286960 ~ 14294449 (-) |
| CI01000304_14265881_14269102 | NA | other | downstream | 473411 | 14265476 ~ 14269571 (-) |
| G427309 | NA | other | downstream | 534683 | 14181932 ~ 14237078 (-) |
| G427154 | NA | other | downstream | 792434 | 13931791 ~ 13950548 (-) |
| G427376 | NA | other | upstream | 515661 | 15258964 ~ 15261405 (-) |
| CI01000304_16769537_16780398 | SUPT20, SUPT20H | other | upstream | 2036061 | 16769417 ~ 16780398 (-) |
| CI01000304_16854877_16860888 | YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC | other | upstream | 2111262 | 16854565 ~ 16860911 (-) |
| G429331 | NA | other | upstream | 3180560 | 17923863 ~ 17924684 (-) |
| G429499 | NA | other | upstream | 3494416 | 18237719 ~ 18238319 (-) |
