G427579



Basic Information


Item Value
gene id G427579
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 14856975 ~ 14857243 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU490974
GAGAGACCCTCGGCGACGAAACCGAGAGGAGAGGCGGCAGAGAATCTCAGCAGCTGAGGGGGAGAAATGGTGTTTACGACATAATCGCCGAGGAGCATGACTTATCTGTGGCACACGCTCGTGTTTGTGATGAGAGGACTGCTGGGATGTGCCAGCGTCTTCCCTGGAAGAGGCTTACGGAACACTCTAAGCTATGGAGGTGTCATTTCAGCACAGTGTGGTTTTTCACCAACACCAGAGCCATGAATACCAAACCAAACGGTTTGTAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU490974 True 269 lncRNA 0.52 1 14856975 14857243

Neighbor


gene id symbol gene type direction distance location
CI01000304_14834446_14835469 NA coding downstream 21426 14834414 ~ 14835549 (-)
CI01000304_14753489_14803322 OPCML coding downstream 53653 14753489 ~ 14803322 (-)
CI01000304_14381274_14385770 LIM2.1 coding downstream 471205 14380998 ~ 14385770 (-)
CI01000304_14377465_14379055 BSX coding downstream 477920 14376532 ~ 14379055 (-)
CI01000304_14333374_14339329 ZPR1 coding downstream 516857 14333182 ~ 14340118 (-)
CI01000304_14949765_14955677 PANX3 coding upstream 91944 14949187 ~ 14955677 (-)
CI01000304_14957226_14983228 PKNOX2 coding upstream 99360 14956603 ~ 14983228 (-)
CI01000304_15075003_15110723 ROBO3 coding upstream 217058 15074301 ~ 15110996 (-)
CI01000304_15132805_15136196 ROBO3, ROBO2 coding upstream 274984 15132227 ~ 15136196 (-)
CI01000304_15322368_15331609 FEZ1 coding upstream 464547 15321790 ~ 15331739 (-)
G427575 NA non-coding downstream 12596 14844045 ~ 14844379 (-)
G427574 NA non-coding downstream 13175 14843577 ~ 14843800 (-)
G427570 NA non-coding downstream 113672 14742982 ~ 14743303 (-)
G427434 NA non-coding downstream 461151 14395544 ~ 14395824 (-)
G427424 NA non-coding downstream 492660 14364021 ~ 14364315 (-)
G427583 NA non-coding upstream 4157 14861400 ~ 14861868 (-)
G427588 NA non-coding upstream 58220 14915463 ~ 14915671 (-)
G427631 NA non-coding upstream 337033 15194276 ~ 15194659 (-)
G427632 NA non-coding upstream 346021 15203264 ~ 15203501 (-)
G427657 NA non-coding upstream 417973 15275216 ~ 15275669 (-)
G427423 NA other downstream 495083 14361448 ~ 14361892 (-)
CI01000304_14286960_14294449 NA other downstream 569371 14286960 ~ 14294449 (-)
CI01000304_14265881_14269102 NA other downstream 587404 14265476 ~ 14269571 (-)
G427309 NA other downstream 648676 14181932 ~ 14237078 (-)
G427154 NA other downstream 906427 13931791 ~ 13950548 (-)
G427376 NA other upstream 401721 15258964 ~ 15261405 (-)
CI01000304_16769537_16780398 SUPT20, SUPT20H other upstream 1922121 16769417 ~ 16780398 (-)
CI01000304_16854877_16860888 YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC other upstream 1997322 16854565 ~ 16860911 (-)
G429331 NA other upstream 3066620 17923863 ~ 17924684 (-)
G429499 NA other upstream 3380476 18237719 ~ 18238319 (-)

Expression



Co-expression Network