G426798


Basic Information

Item Value
gene id G426798
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 14873990 ~ 14874261 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490031
CGAAGACCTGCACGGCAAACATGGCAGATTACAAATCTCAAGAAGGCATCTAAAATTGACCATTTCTAGAGTTAAGAGGACAAAATAGCAACAAGAACAGGGAAGGTTTGATTCCCAAGCAGCAAAATGATGAGTTTCTCTGTGTAGGTATACTGTCTGTCAGACAACATCTTATACAGATAATAGCATTGCAGTGGAAAGTAAATGGAGTTTGTTAAAGCAGGTGACAGCGTGGGGTGACCTTATCAAAGTGTGATAAAGAGGAAATGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490031 True 272 lncRNA 0.41 1 14873990 14874261

Neighbor

gene id symbol gene type direction distance location
CI01000304_14695603_14740389 NTM coding upstream 132911 14695603 ~ 14741079 (+)
CI01000304_14356867_14373980 NA coding upstream 499324 14356586 ~ 14374666 (+)
CI01000304_14352375_14355516 HSP70, HSP7C, HSPA8, HSPA1L.S coding upstream 518474 14352375 ~ 14355516 (+)
CI01000304_14331169_14331855 HIST1H2AD.L, HIST2H2AB, H2AFX.L, HIST1H2AH, HIST1H2AJ coding upstream 542017 14331064 ~ 14331973 (+)
CI01000304_14304022_14317252 HYOU1 coding upstream 555965 14304022 ~ 14318025 (+)
CI01000304_15034188_15038152 TMEM218 coding downstream 157956 15032081 ~ 15038498 (+)
CI01000304_15040739_15045239 NA coding downstream 166291 15040552 ~ 15045257 (+)
CI01000304_15047768_15063987 ROBO4 coding downstream 173507 15047768 ~ 15064170 (+)
CI01000304_15140709_15147357 NA coding downstream 266300 15140561 ~ 15147557 (+)
CI01000304_15148523_15151340 NA coding downstream 273573 15147834 ~ 15151395 (+)
G426796 NA non-coding upstream 1132 14872548 ~ 14872858 (+)
G426793 NA non-coding upstream 5833 14867883 ~ 14868157 (+)
G426792 NA non-coding upstream 12718 14861027 ~ 14861272 (+)
G426787 NA non-coding upstream 22605 14851167 ~ 14851385 (+)
G426784 NA non-coding upstream 26142 14847612 ~ 14847848 (+)
G426800 NA non-coding downstream 2809 14877070 ~ 14877349 (+)
G426801 NA non-coding downstream 3743 14878004 ~ 14878206 (+)
G426806 NA non-coding downstream 9814 14884075 ~ 14884278 (+)
G426807 NA non-coding downstream 10353 14884614 ~ 14884898 (+)
G426808 NA non-coding downstream 11480 14885741 ~ 14885964 (+)
G426312 NA other upstream 543104 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1295143 13578049 ~ 13595097 (+)
G425718 NA other upstream 2434904 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 4318286 10555216 ~ 10572164 (+)
G424251 NA other upstream 4681095 10188822 ~ 10189404 (+)
G426828 NA other downstream 74629 14948890 ~ 14950592 (+)
G427860 NA other downstream 1011193 15885454 ~ 15889591 (+)
G428017 NA other downstream 1208969 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 1630601 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1881685 16761372 ~ 16765057 (+)

Expression


Co-expression Network