G426800


Basic Information

Item Value
gene id G426800
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 14877070 ~ 14877349 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490033
AGAAAGCAAAAGGTAGCTCTCTGCTGTCATCTCCTCTGCCAACAGACTTCCGCATAAAGCGGTGCAGGGTTGCCAAAACAAGCCTGCTTCATTCATCAACAGCTCTAATTAGGTTGTCGAAAGCACTTATTACATTGAGAGCACAAACCGTTCAATCCTAATGGGAGTGAACACTATTGATGGTGGCTACTGCAAATTCAGAATTATTAGAATCACAGGTAATGCCAAATTGACTCAAATTTAACAAACCTGGCAACACTTTCAGCATACAATTGTTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490033 True 280 lncRNA 0.41 1 14877070 14877349

Neighbor

gene id symbol gene type direction distance location
CI01000304_14695603_14740389 NTM coding upstream 135991 14695603 ~ 14741079 (+)
CI01000304_14356867_14373980 NA coding upstream 502404 14356586 ~ 14374666 (+)
CI01000304_14352375_14355516 HSP70, HSP7C, HSPA8, HSPA1L.S coding upstream 521554 14352375 ~ 14355516 (+)
CI01000304_14331169_14331855 HIST1H2AD.L, HIST2H2AB, H2AFX.L, HIST1H2AH, HIST1H2AJ coding upstream 545097 14331064 ~ 14331973 (+)
CI01000304_14304022_14317252 HYOU1 coding upstream 559045 14304022 ~ 14318025 (+)
CI01000304_15034188_15038152 TMEM218 coding downstream 154868 15032081 ~ 15038498 (+)
CI01000304_15040739_15045239 NA coding downstream 163203 15040552 ~ 15045257 (+)
CI01000304_15047768_15063987 ROBO4 coding downstream 170419 15047768 ~ 15064170 (+)
CI01000304_15140709_15147357 NA coding downstream 263212 15140561 ~ 15147557 (+)
CI01000304_15148523_15151340 NA coding downstream 270485 15147834 ~ 15151395 (+)
G426798 NA non-coding upstream 2809 14873990 ~ 14874261 (+)
G426796 NA non-coding upstream 4212 14872548 ~ 14872858 (+)
G426793 NA non-coding upstream 8913 14867883 ~ 14868157 (+)
G426792 NA non-coding upstream 15798 14861027 ~ 14861272 (+)
G426787 NA non-coding upstream 25685 14851167 ~ 14851385 (+)
G426801 NA non-coding downstream 655 14878004 ~ 14878206 (+)
G426806 NA non-coding downstream 6726 14884075 ~ 14884278 (+)
G426807 NA non-coding downstream 7265 14884614 ~ 14884898 (+)
G426808 NA non-coding downstream 8392 14885741 ~ 14885964 (+)
G426809 NA non-coding downstream 9205 14886554 ~ 14886843 (+)
G426312 NA other upstream 546184 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1298223 13578049 ~ 13595097 (+)
G425718 NA other upstream 2437984 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 4321366 10555216 ~ 10572164 (+)
G424251 NA other upstream 4684175 10188822 ~ 10189404 (+)
G426828 NA other downstream 71541 14948890 ~ 14950592 (+)
G427860 NA other downstream 1008105 15885454 ~ 15889591 (+)
G428017 NA other downstream 1205881 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 1627513 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1878597 16761372 ~ 16765057 (+)

Expression


Co-expression Network