Gene
RNA
| Item | Value |
|---|---|
| gene id | G427588 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 14915463 ~ 14915671 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU490983 | True | 209 | lncRNA | 0.33 | 1 | 14915463 | 14915671 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_14834446_14835469 | NA | coding | downstream | 79914 | 14834414 ~ 14835549 (-) |
| CI01000304_14753489_14803322 | OPCML | coding | downstream | 112141 | 14753489 ~ 14803322 (-) |
| CI01000304_14381274_14385770 | LIM2.1 | coding | downstream | 529693 | 14380998 ~ 14385770 (-) |
| CI01000304_14377465_14379055 | BSX | coding | downstream | 536408 | 14376532 ~ 14379055 (-) |
| CI01000304_14333374_14339329 | ZPR1 | coding | downstream | 575345 | 14333182 ~ 14340118 (-) |
| CI01000304_14949765_14955677 | PANX3 | coding | upstream | 33516 | 14949187 ~ 14955677 (-) |
| CI01000304_14957226_14983228 | PKNOX2 | coding | upstream | 40932 | 14956603 ~ 14983228 (-) |
| CI01000304_15075003_15110723 | ROBO3 | coding | upstream | 158630 | 15074301 ~ 15110996 (-) |
| CI01000304_15132805_15136196 | ROBO3, ROBO2 | coding | upstream | 216556 | 15132227 ~ 15136196 (-) |
| CI01000304_15322368_15331609 | FEZ1 | coding | upstream | 406119 | 15321790 ~ 15331739 (-) |
| G427583 | NA | non-coding | downstream | 53595 | 14861400 ~ 14861868 (-) |
| G427579 | NA | non-coding | downstream | 58220 | 14856975 ~ 14857243 (-) |
| G427575 | NA | non-coding | downstream | 71084 | 14844045 ~ 14844379 (-) |
| G427574 | NA | non-coding | downstream | 71663 | 14843577 ~ 14843800 (-) |
| G427570 | NA | non-coding | downstream | 172160 | 14742982 ~ 14743303 (-) |
| G427631 | NA | non-coding | upstream | 278605 | 15194276 ~ 15194659 (-) |
| G427632 | NA | non-coding | upstream | 287593 | 15203264 ~ 15203501 (-) |
| G427657 | NA | non-coding | upstream | 359545 | 15275216 ~ 15275669 (-) |
| G428340 | NA | non-coding | upstream | 550254 | 15465925 ~ 15466511 (-) |
| G428376 | NA | non-coding | upstream | 571708 | 15487379 ~ 15487595 (-) |
| G427423 | NA | other | downstream | 553571 | 14361448 ~ 14361892 (-) |
| CI01000304_14286960_14294449 | NA | other | downstream | 627859 | 14286960 ~ 14294449 (-) |
| CI01000304_14265881_14269102 | NA | other | downstream | 645892 | 14265476 ~ 14269571 (-) |
| G427309 | NA | other | downstream | 707164 | 14181932 ~ 14237078 (-) |
| G427154 | NA | other | downstream | 964915 | 13931791 ~ 13950548 (-) |
| G427376 | NA | other | upstream | 343293 | 15258964 ~ 15261405 (-) |
| CI01000304_16769537_16780398 | SUPT20, SUPT20H | other | upstream | 1863693 | 16769417 ~ 16780398 (-) |
| CI01000304_16854877_16860888 | YPEL2A, YPEL2B, YPEL1, YPEL2, YPEL1.L, YPELD, YPELC | other | upstream | 1938894 | 16854565 ~ 16860911 (-) |
| G429331 | NA | other | upstream | 3008192 | 17923863 ~ 17924684 (-) |
| G429499 | NA | other | upstream | 3322048 | 18237719 ~ 18238319 (-) |
