G426834


Basic Information

Item Value
gene id G426834
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 14931691 ~ 14931927 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU490067
CTAAACTTGAGCAACTTGTCTCCTCAGTCCCCAGATGTTTGCAGACTGTTATAAAAAGAAGAGGGGATGCCACACAGTGGTAAACATGGCCTTGTCACAACTTTTTTGAGATGTGTTGATGCCATGAAATTTAAAATCAACTTATTTTTCCCTTAAAATGATAAATTTTCTCAGTTTAAACATTTGATATGTCATCTATGTTGTATTCTGAATAAAATATTGAAATTTGAAACTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU490067 True 237 lncRNA 0.33 1 14931691 14931927

Neighbor

gene id symbol gene type direction distance location
CI01000304_14695603_14740389 NTM coding upstream 190612 14695603 ~ 14741079 (+)
CI01000304_14356867_14373980 NA coding upstream 557025 14356586 ~ 14374666 (+)
CI01000304_14352375_14355516 HSP70, HSP7C, HSPA8, HSPA1L.S coding upstream 576175 14352375 ~ 14355516 (+)
CI01000304_14331169_14331855 HIST1H2AD.L, HIST2H2AB, H2AFX.L, HIST1H2AH, HIST1H2AJ coding upstream 599718 14331064 ~ 14331973 (+)
CI01000304_14304022_14317252 HYOU1 coding upstream 613666 14304022 ~ 14318025 (+)
CI01000304_15034188_15038152 TMEM218 coding downstream 100290 15032081 ~ 15038498 (+)
CI01000304_15040739_15045239 NA coding downstream 108625 15040552 ~ 15045257 (+)
CI01000304_15047768_15063987 ROBO4 coding downstream 115841 15047768 ~ 15064170 (+)
CI01000304_15140709_15147357 NA coding downstream 208634 15140561 ~ 15147557 (+)
CI01000304_15148523_15151340 NA coding downstream 215907 15147834 ~ 15151395 (+)
G426833 NA non-coding upstream 898 14930508 ~ 14930793 (+)
G426825 NA non-coding upstream 23195 14908128 ~ 14908496 (+)
G426814 NA non-coding upstream 40236 14891231 ~ 14891455 (+)
G426813 NA non-coding upstream 41244 14890204 ~ 14890447 (+)
G426809 NA non-coding upstream 44848 14886554 ~ 14886843 (+)
G426851 NA non-coding downstream 9997 14941924 ~ 14942214 (+)
G426853 NA non-coding downstream 11717 14943644 ~ 14943860 (+)
G426920 NA non-coding downstream 217915 15149842 ~ 15150398 (+)
G426923 NA non-coding downstream 243352 15175279 ~ 15175635 (+)
G426312 NA other upstream 600805 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1352844 13578049 ~ 13595097 (+)
G425718 NA other upstream 2492605 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 4375987 10555216 ~ 10572164 (+)
G424251 NA other upstream 4738796 10188822 ~ 10189404 (+)
G426828 NA other downstream 16963 14948890 ~ 14950592 (+)
G427860 NA other downstream 953527 15885454 ~ 15889591 (+)
G428017 NA other downstream 1151303 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 1572935 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1824019 16761372 ~ 16765057 (+)

Expression


Co-expression Network